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CAZyme Information: MGYG000000644_00784

You are here: Home > Sequence: MGYG000000644_00784

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Prevotella sp900546535
Lineage Bacteria; Bacteroidota; Bacteroidia; Bacteroidales; Bacteroidaceae; Prevotella; Prevotella sp900546535
CAZyme ID MGYG000000644_00784
CAZy Family GH28
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
455 MGYG000000644_13|CGC1 50328.83 6.0458
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000000644 3556677 MAG Madagascar Africa
Gene Location Start: 36518;  End: 37885  Strand: -

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000000644_00784.

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH28 48 403 4.7e-63 0.9353846153846154

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
COG5434 Pgu1 8.36e-54 21 310 80 396
Polygalacturonase [Carbohydrate transport and metabolism].
PLN02188 PLN02188 3.49e-21 24 395 37 377
polygalacturonase/glycoside hydrolase family protein
PLN03010 PLN03010 1.99e-17 4 309 25 307
polygalacturonase
PLN03003 PLN03003 2.25e-17 20 310 20 289
Probable polygalacturonase At3g15720
PLN02793 PLN02793 7.98e-17 22 392 51 394
Probable polygalacturonase

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
BCS85558.1 2.43e-211 27 437 1 411
ADE82966.1 4.28e-199 1 416 1 416
QVJ79670.1 7.03e-198 1 416 1 416
AGB27557.1 2.01e-197 22 434 23 435
QDO68557.1 1.07e-194 21 441 26 446

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
5OLP_A 1.45e-29 22 267 43 312
Galacturonidase[Bacteroides thetaiotaomicron VPI-5482],5OLP_B Galacturonidase [Bacteroides thetaiotaomicron VPI-5482]
3JUR_A 2.75e-16 22 238 26 270
Thecrystal structure of a hyperthermoactive Exopolygalacturonase from Thermotoga maritima [Thermotoga maritima],3JUR_B The crystal structure of a hyperthermoactive Exopolygalacturonase from Thermotoga maritima [Thermotoga maritima],3JUR_C The crystal structure of a hyperthermoactive Exopolygalacturonase from Thermotoga maritima [Thermotoga maritima],3JUR_D The crystal structure of a hyperthermoactive Exopolygalacturonase from Thermotoga maritima [Thermotoga maritima]
4MXN_A 2.22e-14 21 254 19 236
Crystalstructure of a putative glycosyl hydrolase (PARMER_00599) from Parabacteroides merdae ATCC 43184 at 1.95 A resolution [Parabacteroides merdae ATCC 43184],4MXN_B Crystal structure of a putative glycosyl hydrolase (PARMER_00599) from Parabacteroides merdae ATCC 43184 at 1.95 A resolution [Parabacteroides merdae ATCC 43184],4MXN_C Crystal structure of a putative glycosyl hydrolase (PARMER_00599) from Parabacteroides merdae ATCC 43184 at 1.95 A resolution [Parabacteroides merdae ATCC 43184],4MXN_D Crystal structure of a putative glycosyl hydrolase (PARMER_00599) from Parabacteroides merdae ATCC 43184 at 1.95 A resolution [Parabacteroides merdae ATCC 43184]
2UVE_A 2.33e-09 25 231 158 405
Structureof Yersinia enterocolitica Family 28 Exopolygalacturonase [Yersinia enterocolitica],2UVE_B Structure of Yersinia enterocolitica Family 28 Exopolygalacturonase [Yersinia enterocolitica],2UVF_A Structure of Yersinia enterocolitica Family 28 Exopolygalacturonase in Complex with Digalaturonic Acid [Yersinia enterocolitica],2UVF_B Structure of Yersinia enterocolitica Family 28 Exopolygalacturonase in Complex with Digalaturonic Acid [Yersinia enterocolitica]
1BHE_A 1.94e-08 43 272 29 270
ChainA, POLYGALACTURONASE [Pectobacterium carotovorum]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
A7PZL3 9.75e-18 14 267 55 314
Probable polygalacturonase OS=Vitis vinifera OX=29760 GN=GSVIVT00026920001 PE=1 SV=1
Q9LW07 2.08e-15 22 235 22 217
Probable polygalacturonase At3g15720 OS=Arabidopsis thaliana OX=3702 GN=At3g15720 PE=3 SV=1
Q02096 3.69e-12 25 235 86 285
Polygalacturonase OS=Persea americana OX=3435 PE=2 SV=1
Q94AJ5 4.64e-12 22 233 51 254
Probable polygalacturonase At1g80170 OS=Arabidopsis thaliana OX=3702 GN=At1g80170 PE=1 SV=1
Q949Z1 1.19e-11 21 233 77 287
Polygalacturonase At1g48100 OS=Arabidopsis thaliana OX=3702 GN=At1g48100 PE=2 SV=1

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.000216 0.999159 0.000163 0.000148 0.000143 0.000137

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000000644_00784.