logo
sublogo
You are browsing environment: HUMAN GUT
help

CAZyme Information: MGYG000000644_01608

You are here: Home > Sequence: MGYG000000644_01608

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Prevotella sp900546535
Lineage Bacteria; Bacteroidota; Bacteroidia; Bacteroidales; Bacteroidaceae; Prevotella; Prevotella sp900546535
CAZyme ID MGYG000000644_01608
CAZy Family PL1
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
596 MGYG000000644_37|CGC1 65151.3 7.2531
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000000644 3556677 MAG Madagascar Africa
Gene Location Start: 16346;  End: 18136  Strand: -

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000000644_01608.

CAZyme Signature Domains help

Family Start End Evalue family coverage
PL1 65 267 1.3e-64 0.994535519125683

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
COG3866 PelB 5.08e-05 28 213 49 239
Pectate lyase [Carbohydrate transport and metabolism].
pfam18884 TSP3_bac 5.12e-04 472 493 1 22
Bacterial TSP3 repeat. This entry contains a novel bacterial thrombospondin type 3 repeat which differs from the typical consensus by containing a glutamate in place of one of the calcium binding aspartate residues.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
QNT67774.1 0.0 12 596 2 586
AGB28243.1 3.47e-227 11 549 19 536
VEH16322.1 2.16e-226 9 549 22 541
QCD40778.1 2.47e-215 12 596 17 598
QCP73827.1 2.47e-215 12 596 17 598

PDB Hits      help

has no PDB hit.

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
B8NQQ7 1.39e-40 16 518 22 414
Probable pectate lyase C OS=Aspergillus flavus (strain ATCC 200026 / FGSC A1120 / IAM 13836 / NRRL 3357 / JCM 12722 / SRRC 167) OX=332952 GN=plyC PE=3 SV=1
Q0CLG7 4.96e-40 16 518 22 414
Probable pectate lyase C OS=Aspergillus terreus (strain NIH 2624 / FGSC A1156) OX=341663 GN=plyC PE=3 SV=1
A1DPF0 5.06e-40 5 518 8 415
Probable pectate lyase C OS=Neosartorya fischeri (strain ATCC 1020 / DSM 3700 / CBS 544.65 / FGSC A1164 / JCM 1740 / NRRL 181 / WB 181) OX=331117 GN=plyC PE=3 SV=1
B0XMA2 5.06e-40 5 518 8 415
Probable pectate lyase C OS=Neosartorya fumigata (strain CEA10 / CBS 144.89 / FGSC A1163) OX=451804 GN=plyC PE=3 SV=1
Q4WL88 1.31e-39 5 518 8 415
Probable pectate lyase C OS=Neosartorya fumigata (strain ATCC MYA-4609 / Af293 / CBS 101355 / FGSC A1100) OX=330879 GN=plyC PE=3 SV=1

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.001589 0.997031 0.000285 0.000418 0.000343 0.000297

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000000644_01608.