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CAZyme Information: MGYG000000650_01752
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Basic Information |
Genomic context |
Full Sequence |
Enzyme annotations |
CAZy signature domains |
CDD domains |
CAZyme hits |
PDB hits |
Swiss-Prot hits |
SignalP and Lipop annotations |
TMHMM annotations
Basic Information help
| Species | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Lineage | Bacteria; Firmicutes_A; Clostridia; Lachnospirales; Lachnospiraceae; Enterocloster; | |||||||||||
| CAZyme ID | MGYG000000650_01752 | |||||||||||
| CAZy Family | GH28 | |||||||||||
| CAZyme Description | Polygalacturonase | |||||||||||
| CAZyme Property |
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| Genome Property |
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| Gene Location | Start: 12873; End: 13919 Strand: - | |||||||||||
CAZyme Signature Domains help
| Family | Start | End | Evalue | family coverage |
|---|---|---|---|---|
| GH28 | 3 | 290 | 4.4e-63 | 0.7569230769230769 |
CDD Domains download full data without filtering help
| Cdd ID | Domain | E-Value | qStart | qEnd | sStart | sEnd | Domain Description |
|---|---|---|---|---|---|---|---|
| COG5434 | Pgu1 | 2.95e-57 | 2 | 330 | 188 | 536 | Polygalacturonase [Carbohydrate transport and metabolism]. |
| pfam00295 | Glyco_hydro_28 | 7.36e-24 | 6 | 209 | 48 | 239 | Glycosyl hydrolases family 28. Glycosyl hydrolase family 28 includes polygalacturonase EC:3.2.1.15 as well as rhamnogalacturonase A(RGase A), EC:3.2.1.-. These enzymes are important in cell wall metabolism. |
| PLN03003 | PLN03003 | 7.54e-22 | 11 | 233 | 112 | 315 | Probable polygalacturonase At3g15720 |
| PLN02793 | PLN02793 | 5.62e-20 | 11 | 223 | 142 | 342 | Probable polygalacturonase |
| PLN02218 | PLN02218 | 9.66e-17 | 11 | 225 | 155 | 359 | polygalacturonase ADPG |
CAZyme Hits help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End |
|---|---|---|---|---|---|
| ABX43097.1 | 4.03e-143 | 2 | 338 | 180 | 513 |
| BCJ93649.1 | 8.08e-143 | 1 | 338 | 179 | 513 |
| QHQ62181.1 | 2.95e-139 | 1 | 337 | 178 | 511 |
| BCJ96409.1 | 2.18e-137 | 2 | 341 | 179 | 515 |
| QRP36832.1 | 1.03e-136 | 1 | 337 | 179 | 515 |
PDB Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| 3JUR_A | 2.83e-29 | 2 | 291 | 113 | 417 | Thecrystal structure of a hyperthermoactive Exopolygalacturonase from Thermotoga maritima [Thermotoga maritima],3JUR_B The crystal structure of a hyperthermoactive Exopolygalacturonase from Thermotoga maritima [Thermotoga maritima],3JUR_C The crystal structure of a hyperthermoactive Exopolygalacturonase from Thermotoga maritima [Thermotoga maritima],3JUR_D The crystal structure of a hyperthermoactive Exopolygalacturonase from Thermotoga maritima [Thermotoga maritima] |
| 5OLP_A | 3.88e-21 | 45 | 191 | 199 | 344 | Galacturonidase[Bacteroides thetaiotaomicron VPI-5482],5OLP_B Galacturonidase [Bacteroides thetaiotaomicron VPI-5482] |
Swiss-Prot Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| P27644 | 2.66e-50 | 34 | 310 | 10 | 287 | Polygalacturonase OS=Rhizobium radiobacter OX=358 GN=pgl PE=2 SV=1 |
| A7PZL3 | 1.90e-29 | 2 | 290 | 157 | 430 | Probable polygalacturonase OS=Vitis vinifera OX=29760 GN=GSVIVT00026920001 PE=1 SV=1 |
| Q9LW07 | 4.07e-22 | 11 | 233 | 112 | 315 | Probable polygalacturonase At3g15720 OS=Arabidopsis thaliana OX=3702 GN=At3g15720 PE=3 SV=1 |
| P43212 | 6.87e-20 | 11 | 219 | 145 | 346 | Polygalacturonase OS=Cryptomeria japonica OX=3369 PE=1 SV=1 |
| Q9FY19 | 9.07e-20 | 16 | 219 | 151 | 347 | Polygalacturonase OS=Juniperus ashei OX=13101 GN=JNA2 PE=1 SV=1 |
SignalP and Lipop Annotations help
This protein is predicted as OTHER
| Other | SP_Sec_SPI | LIPO_Sec_SPII | TAT_Tat_SPI | TATLIP_Sec_SPII | PILIN_Sec_SPIII |
|---|---|---|---|---|---|
| 0.890666 | 0.106712 | 0.001633 | 0.000318 | 0.000184 | 0.000508 |