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CAZyme Information: MGYG000000653_01598
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Basic Information |
Genomic context |
Full Sequence |
Enzyme annotations |
CAZy signature domains |
CDD domains |
CAZyme hits |
PDB hits |
Swiss-Prot hits |
SignalP and Lipop annotations |
TMHMM annotations
Basic Information help
| Species | UBA11471 sp000434215 | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Lineage | Bacteria; Bacteroidota; Bacteroidia; Bacteroidales; UBA11471; UBA11471; UBA11471 sp000434215 | |||||||||||
| CAZyme ID | MGYG000000653_01598 | |||||||||||
| CAZy Family | PL1 | |||||||||||
| CAZyme Description | hypothetical protein | |||||||||||
| CAZyme Property |
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| Genome Property |
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| Gene Location | Start: 110943; End: 112367 Strand: + | |||||||||||
CAZyme Signature Domains help
| Family | Start | End | Evalue | family coverage |
|---|---|---|---|---|
| PL1 | 165 | 331 | 2.3e-42 | 0.7772277227722773 |
CDD Domains download full data without filtering help
| Cdd ID | Domain | E-Value | qStart | qEnd | sStart | sEnd | Domain Description |
|---|---|---|---|---|---|---|---|
| smart00656 | Amb_all | 1.90e-30 | 138 | 330 | 7 | 186 | Amb_all domain. |
| COG3866 | PelB | 2.25e-30 | 7 | 391 | 11 | 342 | Pectate lyase [Carbohydrate transport and metabolism]. |
| pfam00544 | Pec_lyase_C | 4.17e-14 | 176 | 330 | 52 | 211 | Pectate lyase. This enzyme forms a right handed beta helix structure. Pectate lyase is an enzyme involved in the maceration and soft rotting of plant tissue. |
CAZyme Hits help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End |
|---|---|---|---|---|---|
| ADE83376.1 | 5.60e-117 | 28 | 394 | 46 | 421 |
| QVJ81552.1 | 7.92e-117 | 28 | 394 | 46 | 421 |
| AAW84045.1 | 1.09e-113 | 65 | 398 | 1 | 328 |
| QXU43060.1 | 4.63e-48 | 164 | 394 | 123 | 362 |
| AHJ96631.1 | 5.10e-48 | 121 | 394 | 79 | 364 |
PDB Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| 1VBL_A | 5.63e-19 | 174 | 331 | 146 | 331 | Structureof the thermostable pectate lyase PL 47 [Bacillus sp. TS-47] |
| 3ZSC_A | 1.80e-17 | 143 | 306 | 51 | 213 | Catalyticfunction and substrate recognition of the pectate lyase from Thermotoga maritima [Thermotoga maritima] |
| 3KRG_A | 5.82e-14 | 184 | 390 | 150 | 368 | ChainA, Pectate lyase [Bacillus subtilis] |
| 5AMV_A | 2.46e-13 | 184 | 390 | 150 | 368 | Structuralinsights into the loss of catalytic competence in pectate lyase at low pH [Bacillus subtilis],5X2I_A Polygalacturonate Lyase by Fusing with a Self-assembling Amphipathic Peptide [Bacillus subtilis subsp. subtilis str. 168] |
| 1BN8_A | 2.71e-13 | 184 | 390 | 171 | 389 | BacillusSubtilis Pectate Lyase [Bacillus subtilis] |
Swiss-Prot Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| Q9WYR4 | 9.00e-21 | 143 | 306 | 78 | 240 | Pectate trisaccharide-lyase OS=Thermotoga maritima (strain ATCC 43589 / DSM 3109 / JCM 10099 / NBRC 100826 / MSB8) OX=243274 GN=pelA PE=1 SV=1 |
| B1L969 | 2.94e-20 | 143 | 306 | 76 | 238 | Pectate trisaccharide-lyase OS=Thermotoga sp. (strain RQ2) OX=126740 GN=pelA PE=3 SV=1 |
| A2QV36 | 3.14e-20 | 184 | 394 | 118 | 321 | Probable pectate lyase A OS=Aspergillus niger (strain CBS 513.88 / FGSC A1513) OX=425011 GN=plyA PE=3 SV=1 |
| Q9C2Z0 | 3.14e-20 | 184 | 394 | 118 | 321 | Pectate lyase A OS=Aspergillus niger OX=5061 GN=plyA PE=1 SV=1 |
| B0XT32 | 1.58e-18 | 185 | 395 | 117 | 320 | Probable pectate lyase A OS=Neosartorya fumigata (strain CEA10 / CBS 144.89 / FGSC A1163) OX=451804 GN=plyA PE=3 SV=1 |
SignalP and Lipop Annotations help
This protein is predicted as SP
| Other | SP_Sec_SPI | LIPO_Sec_SPII | TAT_Tat_SPI | TATLIP_Sec_SPII | PILIN_Sec_SPIII |
|---|---|---|---|---|---|
| 0.000235 | 0.999091 | 0.000193 | 0.000166 | 0.000154 | 0.000141 |