logo
sublogo
You are browsing environment: HUMAN GUT
help

CAZyme Information: MGYG000000653_01689

You are here: Home > Sequence: MGYG000000653_01689

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species UBA11471 sp000434215
Lineage Bacteria; Bacteroidota; Bacteroidia; Bacteroidales; UBA11471; UBA11471; UBA11471 sp000434215
CAZyme ID MGYG000000653_01689
CAZy Family PL1
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
699 MGYG000000653_12|CGC1 76643.13 4.6917
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000000653 2583563 MAG Germany Europe
Gene Location Start: 12530;  End: 14629  Strand: +

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000000653_01689.

CAZyme Signature Domains help

Family Start End Evalue family coverage
PL1 75 261 1e-77 0.994535519125683

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
COG3866 PelB 1.24e-06 24 382 29 341
Pectate lyase [Carbohydrate transport and metabolism].
smart00656 Amb_all 0.002 69 219 3 151
Amb_all domain.
pfam00544 Pec_lyase_C 0.004 113 218 58 175
Pectate lyase. This enzyme forms a right handed beta helix structure. Pectate lyase is an enzyme involved in the maceration and soft rotting of plant tissue.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
QUT77823.1 9.46e-203 22 486 50 518
ALJ61309.1 4.35e-201 18 483 42 515
QUT93111.1 5.35e-201 18 483 38 511
QUT75603.1 3.93e-200 8 495 3 497
QDO69223.1 3.22e-197 21 483 41 511

PDB Hits      help

has no PDB hit.

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
B8NQQ7 1.12e-54 17 483 14 414
Probable pectate lyase C OS=Aspergillus flavus (strain ATCC 200026 / FGSC A1120 / IAM 13836 / NRRL 3357 / JCM 12722 / SRRC 167) OX=332952 GN=plyC PE=3 SV=1
Q2UB83 4.10e-54 17 483 14 414
Probable pectate lyase C OS=Aspergillus oryzae (strain ATCC 42149 / RIB 40) OX=510516 GN=plyC PE=3 SV=1
Q5B297 5.52e-52 23 485 20 413
Probable pectate lyase C OS=Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) OX=227321 GN=plyC PE=3 SV=1
B0XMA2 9.83e-51 23 483 21 415
Probable pectate lyase C OS=Neosartorya fumigata (strain CEA10 / CBS 144.89 / FGSC A1163) OX=451804 GN=plyC PE=3 SV=1
Q4WL88 1.36e-50 23 483 21 415
Probable pectate lyase C OS=Neosartorya fumigata (strain ATCC MYA-4609 / Af293 / CBS 101355 / FGSC A1100) OX=330879 GN=plyC PE=3 SV=1

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.000194 0.999209 0.000159 0.000149 0.000144 0.000133

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000000653_01689.