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CAZyme Information: MGYG000000666_01089

You are here: Home > Sequence: MGYG000000666_01089

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species
Lineage Bacteria; Verrucomicrobiota; Lentisphaeria; Victivallales; UBA1829; ;
CAZyme ID MGYG000000666_01089
CAZy Family GH50
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
683 78622.57 10.0426
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000000666 4523435 MAG Kazakhstan Asia
Gene Location Start: 1710;  End: 3761  Strand: -

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000000666_01089.

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH50 316 670 6.8e-89 0.55895865237366
GH50 67 308 9.9e-42 0.36294027565084225

CDD Domains      help

MGYG000000666_01089 has no CDD domain.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
AVM45357.1 0.0 13 683 14 683
AHF89577.1 8.57e-261 10 683 17 698
AHF89585.1 1.40e-257 3 683 4 690
AXP07841.1 3.56e-225 46 683 67 701
ASV75458.1 1.75e-135 31 673 31 681

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
4BQ2_A 1.18e-84 180 677 184 750
Structuralanalysis of an exo-beta-agarase [Saccharophagus degradans 2-40],4BQ2_B Structural analysis of an exo-beta-agarase [Saccharophagus degradans 2-40],4BQ2_C Structural analysis of an exo-beta-agarase [Saccharophagus degradans 2-40],4BQ2_D Structural analysis of an exo-beta-agarase [Saccharophagus degradans 2-40],4BQ3_A Structural analysis of an exo-beta-agarase [Saccharophagus degradans 2-40],4BQ3_B Structural analysis of an exo-beta-agarase [Saccharophagus degradans 2-40],4BQ3_C Structural analysis of an exo-beta-agarase [Saccharophagus degradans 2-40],4BQ3_D Structural analysis of an exo-beta-agarase [Saccharophagus degradans 2-40]
4BQ4_A 3.18e-84 180 677 184 750
Structuralanalysis of an exo-beta-agarase [Saccharophagus degradans 2-40],4BQ4_B Structural analysis of an exo-beta-agarase [Saccharophagus degradans 2-40],4BQ5_A Structural analysis of an exo-beta-agarase [Saccharophagus degradans 2-40],4BQ5_B Structural analysis of an exo-beta-agarase [Saccharophagus degradans 2-40]
5Z6P_A 1.17e-79 180 670 203 759
Thecrystal structure of an agarase, AgWH50C [Agarivorans gilvus],5Z6P_B The crystal structure of an agarase, AgWH50C [Agarivorans gilvus]
6XJ9_A 8.33e-78 180 673 203 762
Structureof PfGH50B [Pseudoalteromonas fuliginea],6XJ9_B Structure of PfGH50B [Pseudoalteromonas fuliginea]
5T3B_A 2.05e-21 246 670 84 473
ChainA, Glycoside Hydrolase [Phocaeicola plebeius],5T3B_B Chain B, Glycoside Hydrolase [Phocaeicola plebeius]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
P48840 1.47e-80 152 673 389 952
Beta-agarase B OS=Vibrio sp. (strain JT0107) OX=47913 GN=agaB PE=3 SV=1
P48839 2.47e-55 200 670 395 913
Beta-agarase A OS=Vibrio sp. (strain JT0107) OX=47913 GN=agaA PE=3 SV=1

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.000616 0.998465 0.000301 0.000205 0.000197 0.000184

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000000666_01089.