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CAZyme Information: MGYG000000666_02304

You are here: Home > Sequence: MGYG000000666_02304

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species
Lineage Bacteria; Verrucomicrobiota; Lentisphaeria; Victivallales; UBA1829; ;
CAZyme ID MGYG000000666_02304
CAZy Family GH28
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
481 54760.5 5.2743
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000000666 4523435 MAG Kazakhstan Asia
Gene Location Start: 5734;  End: 7179  Strand: -

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000000666_02304.

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH28 154 463 1.9e-33 0.7169230769230769

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
COG5434 Pgu1 3.05e-10 123 336 117 341
Polygalacturonase [Carbohydrate transport and metabolism].
pfam00295 Glyco_hydro_28 5.94e-08 209 364 88 235
Glycosyl hydrolases family 28. Glycosyl hydrolase family 28 includes polygalacturonase EC:3.2.1.15 as well as rhamnogalacturonase A(RGase A), EC:3.2.1.-. These enzymes are important in cell wall metabolism.
PLN03010 PLN03010 1.20e-06 201 336 152 309
polygalacturonase
PLN02793 PLN02793 6.25e-05 212 281 183 252
Probable polygalacturonase
PLN03003 PLN03003 3.36e-04 214 303 146 257
Probable polygalacturonase At3g15720

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
AHF88976.1 4.80e-116 2 462 66 548
QQR16514.1 3.52e-69 5 438 31 416
ANU58578.2 4.64e-69 5 438 42 427
QQA09746.1 1.01e-39 67 437 117 454
QQT79215.1 1.01e-39 67 437 117 454

PDB Hits      help

has no PDB hit.

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
P49063 1.00e-06 185 366 168 341
Exopolygalacturonase clone GBGA483 OS=Arabidopsis thaliana OX=3702 GN=At3g07850 PE=2 SV=2

SignalP and Lipop Annotations help

This protein is predicted as OTHER

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
1.000064 0.000000 0.000000 0.000000 0.000000 0.000000

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000000666_02304.