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CAZyme Information: MGYG000000672_01060

You are here: Home > Sequence: MGYG000000672_01060

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species RC9 sp000431015
Lineage Bacteria; Bacteroidota; Bacteroidia; Bacteroidales; UBA932; RC9; RC9 sp000431015
CAZyme ID MGYG000000672_01060
CAZy Family PL35
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
629 70149.91 7.1067
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000000672 2733599 MAG Kazakhstan Asia
Gene Location Start: 78218;  End: 80107  Strand: -

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000000672_01060.

CAZyme Signature Domains help

Family Start End Evalue family coverage
PL35 394 569 7.4e-48 0.9441340782122905

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
pfam07940 Hepar_II_III 1.22e-10 399 587 29 208
Heparinase II/III-like protein. This family features sequences that are similar to a region of the Flavobacterium heparinum proteins heparinase II and heparinase III. The former is known to degrade heparin and heparin sulphate, whereas the latter predominantly degrades heparin sulphate. Both are secreted into the periplasmic space upon induction with heparin.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
QGT72631.1 4.98e-204 27 629 48 643
SCV07259.1 7.05e-204 27 629 48 643
QIU93529.1 7.05e-204 27 629 48 643
QUT31752.1 7.05e-204 27 629 48 643
QUT26393.1 7.05e-204 27 629 48 643

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
3A0O_A 7.62e-11 36 324 139 435
Crystalstructure of alginate lyase from Agrobacterium tumefaciens C58 [Agrobacterium fabrum str. C58],3A0O_B Crystal structure of alginate lyase from Agrobacterium tumefaciens C58 [Agrobacterium fabrum str. C58]
3AFL_A 7.62e-11 36 324 139 435
Crystalstructure of exotype alginate lyase Atu3025 H531A complexed with alginate trisaccharide [Agrobacterium fabrum str. C58]

Swiss-Prot Hits      help

has no Swissprot hit.

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.000233 0.999085 0.000191 0.000182 0.000165 0.000149

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000000672_01060.