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CAZyme Information: MGYG000000676_01305

You are here: Home > Sequence: MGYG000000676_01305

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species
Lineage Bacteria; Firmicutes_A; Clostridia_A; Christensenellales; Borkfalkiaceae; Borkfalkia;
CAZyme ID MGYG000000676_01305
CAZy Family CBM67
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
661 MGYG000000676_39|CGC1 75384.88 5.6497
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000000676 2188584 MAG Kazakhstan Asia
Gene Location Start: 14557;  End: 16542  Strand: +

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000000676_01305.

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH78 228 630 5.6e-59 0.8392857142857143
CBM67 11 119 1.3e-16 0.6022727272727273

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
pfam17389 Bac_rhamnosid6H 1.40e-23 310 623 3 339
Bacterial alpha-L-rhamnosidase 6 hairpin glycosidase domain. This family consists of bacterial rhamnosidase A and B enzymes. L-Rhamnose is abundant in biomass as a common constituent of glycolipids and glycosides, such as plant pigments, pectic polysaccharides, gums or biosurfactants. Some rhamnosides are important bioactive compounds. For example, terpenyl glycosides, the glycosidic precursor of aromatic terpenoids, act as important flavouring substances in grapes. Other rhamnosides act as cytotoxic rhamnosylated terpenoids, as signal substances in plants or play a role in the antigenicity of pathogenic bacteria.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
BBD46122.1 1.51e-128 16 629 16 635
QUT89760.1 7.16e-127 10 629 29 659
QDO67668.1 1.04e-126 10 629 30 660
ACU03186.1 2.71e-126 5 640 29 680
ALJ59132.1 3.95e-126 10 629 29 659

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
2OKX_A 5.84e-12 252 640 474 893
Crystalstructure of GH78 family rhamnosidase of Bacillus SP. GL1 AT 1.9 A [Bacillus sp. GL1],2OKX_B Crystal structure of GH78 family rhamnosidase of Bacillus SP. GL1 AT 1.9 A [Bacillus sp. GL1]

Swiss-Prot Hits      help

has no Swissprot hit.

SignalP and Lipop Annotations help

This protein is predicted as OTHER

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
1.000059 0.000000 0.000000 0.000000 0.000000 0.000000

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000000676_01305.