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CAZyme Information: MGYG000000680_00535

You are here: Home > Sequence: MGYG000000680_00535

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species
Lineage Bacteria; Firmicutes_A; Clostridia; Lachnospirales; Lachnospiraceae; UBA3402;
CAZyme ID MGYG000000680_00535
CAZy Family PL12
CAZyme Description Heparin-sulfate lyase
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
646 73836.95 6.3042
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000000680 2323759 MAG Kazakhstan Asia
Gene Location Start: 591;  End: 2531  Strand: +

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000000680_00535.

CAZyme Signature Domains help

Family Start End Evalue family coverage
PL12 387 513 8e-22 0.9420289855072463

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
pfam16889 Hepar_II_III_N 1.63e-24 15 278 38 298
Heparinase II/III N-terminus. This is the N-terminal domain of heparinase II/III proteins. It is a toroid-like domain.
pfam07940 Hepar_II_III 1.57e-15 404 596 39 223
Heparinase II/III-like protein. This family features sequences that are similar to a region of the Flavobacterium heparinum proteins heparinase II and heparinase III. The former is known to degrade heparin and heparin sulphate, whereas the latter predominantly degrades heparin sulphate. Both are secreted into the periplasmic space upon induction with heparin.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
QKS47101.1 4.84e-138 14 602 31 613
AZS17849.1 3.60e-137 17 617 34 633
AIQ21779.1 4.81e-124 17 601 34 609
AIQ33561.1 3.54e-120 17 608 34 617
QUH30173.1 8.82e-113 17 601 31 605

PDB Hits      help

has no PDB hit.

Swiss-Prot Hits      help

has no Swissprot hit.

SignalP and Lipop Annotations help

This protein is predicted as OTHER

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
1.000012 0.000004 0.000000 0.000000 0.000000 0.000000

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000000680_00535.