logo
sublogo
You are browsing environment: HUMAN GUT
help

CAZyme Information: MGYG000000685_00466

You are here: Home > Sequence: MGYG000000685_00466

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species CAG-590 sp900552885
Lineage Bacteria; Firmicutes_A; Clostridia; Lachnospirales; Lachnospiraceae; CAG-590; CAG-590 sp900552885
CAZyme ID MGYG000000685_00466
CAZy Family GT27
CAZyme Description Ribosomal RNA small subunit methyltransferase A
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
1349 MGYG000000685_6|CGC1 156025.01 4.996
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000000685 2863940 MAG Kazakhstan Asia
Gene Location Start: 3373;  End: 7422  Strand: -

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000000685_00466.

CAZyme Signature Domains help

Family Start End Evalue family coverage
GT27 724 970 1.8e-27 0.8745762711864407

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
cd04186 GT_2_like_c 8.17e-47 725 934 1 166
Subfamily of Glycosyltransferase Family GT2 of unknown function. GT-2 includes diverse families of glycosyltransferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. Glycosyltransferases have been classified into more than 90 distinct sequence based families.
COG1216 GT2 1.16e-42 721 939 3 226
Glycosyltransferase, GT2 family [Carbohydrate transport and metabolism].
pfam13692 Glyco_trans_1_4 6.56e-26 1182 1316 4 138
Glycosyl transferases group 1.
cd02525 Succinoglycan_BP_ExoA 8.97e-25 722 933 1 208
ExoA is involved in the biosynthesis of succinoglycan. Succinoglycan Biosynthesis Protein ExoA catalyzes the formation of a beta-1,3 linkage of the second sugar (glucose) of the succinoglycan with the galactose on the lipid carrie. Succinoglycan is an acidic exopolysaccharide that is important for invasion of the nodules. Succinoglycan is a high-molecular-weight polymer composed of repeating octasaccharide units. These units are synthesized on membrane-bound isoprenoid lipid carriers, beginning with galactose followed by seven glucose molecules, and modified by the addition of acetate, succinate, and pyruvate. ExoA is a membrane protein with a transmembrance domain at c-terminus.
COG1215 BcsA 2.45e-23 715 931 48 263
Glycosyltransferase, catalytic subunit of cellulose synthase and poly-beta-1,6-N-acetylglucosamine synthase [Cell motility].

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
ASN93838.1 1.70e-315 38 1349 34 1314
QRP41495.1 1.70e-315 38 1349 34 1314
ANU46567.1 3.50e-315 38 1349 34 1315
QIX92521.1 3.50e-315 38 1349 34 1315
QQQ98718.1 3.50e-315 38 1349 34 1315

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
6E4R_A 4.46e-09 719 966 67 330
CrystalStructure of the Drosophila Melanogaster Polypeptide N-Acetylgalactosaminyl Transferase PGANT9B [Drosophila melanogaster],6E4R_B Crystal Structure of the Drosophila Melanogaster Polypeptide N-Acetylgalactosaminyl Transferase PGANT9B [Drosophila melanogaster]
6E4Q_A 4.49e-09 719 966 67 330
CrystalStructure of the Drosophila Melanogaster Polypeptide N-Acetylgalactosaminyl Transferase PGANT9A in Complex with UDP and Mn2+ [Drosophila melanogaster],6E4Q_B Crystal Structure of the Drosophila Melanogaster Polypeptide N-Acetylgalactosaminyl Transferase PGANT9A in Complex with UDP and Mn2+ [Drosophila melanogaster],6E4Q_C Crystal Structure of the Drosophila Melanogaster Polypeptide N-Acetylgalactosaminyl Transferase PGANT9A in Complex with UDP and Mn2+ [Drosophila melanogaster],6E4Q_D Crystal Structure of the Drosophila Melanogaster Polypeptide N-Acetylgalactosaminyl Transferase PGANT9A in Complex with UDP and Mn2+ [Drosophila melanogaster]
2D7I_A 3.38e-08 721 966 112 369
Crystalstructure of pp-GalNAc-T10 with UDP, GalNAc and Mn2+ [Homo sapiens],2D7R_A Crystal structure of pp-GalNAc-T10 complexed with GalNAc-Ser on lectin domain [Homo sapiens]
5NQA_A 1.34e-07 709 965 123 390
Crystalstructure of GalNAc-T4 in complex with the monoglycopeptide 3 [Homo sapiens],5NQA_B Crystal structure of GalNAc-T4 in complex with the monoglycopeptide 3 [Homo sapiens],6H0B_A Crystal structure of the human GalNAc-T4 in complex with UDP, manganese and the diglycopeptide 6. [Homo sapiens],6H0B_B Crystal structure of the human GalNAc-T4 in complex with UDP, manganese and the diglycopeptide 6. [Homo sapiens]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
P55465 1.27e-15 720 939 624 852
Uncharacterized protein y4gI OS=Sinorhizobium fredii (strain NBRC 101917 / NGR234) OX=394 GN=NGR_a03550 PE=4 SV=1
Q50864 6.75e-14 720 941 573 801
O-antigen biosynthesis protein RfbC OS=Myxococcus xanthus OX=34 GN=rfbC PE=4 SV=1
Q6DJR8 1.29e-11 708 965 132 403
Polypeptide N-acetylgalactosaminyltransferase 11 OS=Xenopus tropicalis OX=8364 GN=galnt11 PE=1 SV=2
A8Y236 1.78e-11 674 965 117 423
Putative polypeptide N-acetylgalactosaminyltransferase 10 OS=Caenorhabditis briggsae OX=6238 GN=gly-10 PE=3 SV=2
Q8NCW6 2.27e-11 719 968 149 413
Polypeptide N-acetylgalactosaminyltransferase 11 OS=Homo sapiens OX=9606 GN=GALNT11 PE=1 SV=2

SignalP and Lipop Annotations help

This protein is predicted as OTHER

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
1.000073 0.000001 0.000000 0.000000 0.000000 0.000000

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000000685_00466.