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CAZyme Information: MGYG000000706_00820
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Basic Information |
Genomic context |
Full Sequence |
Enzyme annotations |
CAZy signature domains |
CDD domains |
CAZyme hits |
PDB hits |
Swiss-Prot hits |
SignalP and Lipop annotations |
TMHMM annotations
Basic Information help
| Species | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Lineage | Bacteria; Firmicutes_A; Clostridia; Monoglobales; Monoglobaceae; UMGS1326; | |||||||||||
| CAZyme ID | MGYG000000706_00820 | |||||||||||
| CAZy Family | GH28 | |||||||||||
| CAZyme Description | hypothetical protein | |||||||||||
| CAZyme Property |
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| Genome Property |
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| Gene Location | Start: 17188; End: 18570 Strand: + | |||||||||||
CAZyme Signature Domains help
| Family | Start | End | Evalue | family coverage |
|---|---|---|---|---|
| GH28 | 183 | 455 | 4.1e-42 | 0.8061538461538461 |
CDD Domains download full data without filtering help
| Cdd ID | Domain | E-Value | qStart | qEnd | sStart | sEnd | Domain Description |
|---|---|---|---|---|---|---|---|
| COG5434 | Pgu1 | 3.54e-12 | 138 | 377 | 118 | 396 | Polygalacturonase [Carbohydrate transport and metabolism]. |
| pfam00295 | Glyco_hydro_28 | 5.47e-09 | 252 | 444 | 116 | 311 | Glycosyl hydrolases family 28. Glycosyl hydrolase family 28 includes polygalacturonase EC:3.2.1.15 as well as rhamnogalacturonase A(RGase A), EC:3.2.1.-. These enzymes are important in cell wall metabolism. |
| PLN03010 | PLN03010 | 2.92e-08 | 268 | 398 | 206 | 326 | polygalacturonase |
| PLN02218 | PLN02218 | 6.51e-05 | 224 | 445 | 195 | 417 | polygalacturonase ADPG |
| pfam13229 | Beta_helix | 0.008 | 224 | 342 | 3 | 112 | Right handed beta helix region. This region contains a parallel beta helix region that shares some similarity with Pectate lyases. |
CAZyme Hits help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End |
|---|---|---|---|---|---|
| QTH43708.1 | 5.13e-144 | 7 | 460 | 8 | 467 |
| AWW32777.1 | 8.78e-57 | 3 | 423 | 27 | 444 |
| SCM55434.1 | 5.04e-56 | 4 | 441 | 25 | 459 |
| APA66227.1 | 8.70e-56 | 3 | 460 | 26 | 497 |
| SDS06655.1 | 1.59e-55 | 3 | 460 | 39 | 510 |
PDB Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| 5OLP_A | 8.70e-12 | 216 | 440 | 195 | 429 | Galacturonidase[Bacteroides thetaiotaomicron VPI-5482],5OLP_B Galacturonidase [Bacteroides thetaiotaomicron VPI-5482] |
Swiss-Prot Hits help
SignalP and Lipop Annotations help
This protein is predicted as OTHER
| Other | SP_Sec_SPI | LIPO_Sec_SPII | TAT_Tat_SPI | TATLIP_Sec_SPII | PILIN_Sec_SPIII |
|---|---|---|---|---|---|
| 0.999923 | 0.000135 | 0.000001 | 0.000000 | 0.000000 | 0.000000 |