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CAZyme Information: MGYG000000706_00826

You are here: Home > Sequence: MGYG000000706_00826

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species
Lineage Bacteria; Firmicutes_A; Clostridia; Monoglobales; Monoglobaceae; UMGS1326;
CAZyme ID MGYG000000706_00826
CAZy Family GH28
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
892 MGYG000000706_6|CGC1 98113.44 4.5038
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000000706 2490616 MAG Kazakhstan Asia
Gene Location Start: 26773;  End: 29451  Strand: +

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000000706_00826.

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH28 615 885 4.1e-40 0.7723076923076924

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
pfam00295 Glyco_hydro_28 1.08e-08 614 885 37 315
Glycosyl hydrolases family 28. Glycosyl hydrolase family 28 includes polygalacturonase EC:3.2.1.15 as well as rhamnogalacturonase A(RGase A), EC:3.2.1.-. These enzymes are important in cell wall metabolism.
PLN03010 PLN03010 1.78e-07 625 872 138 381
polygalacturonase
COG5434 Pgu1 4.39e-07 655 868 245 452
Polygalacturonase [Carbohydrate transport and metabolism].
PLN03003 PLN03003 9.80e-05 625 846 112 334
Probable polygalacturonase At3g15720

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
QTH43708.1 6.38e-108 421 891 8 467
SDS06655.1 2.73e-56 416 891 38 510
APA66227.1 9.89e-56 416 873 25 480
QIU92674.1 3.49e-55 420 875 29 468
ALJ04708.1 3.51e-55 415 886 40 485

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
5OLP_A 1.15e-11 643 775 196 335
Galacturonidase[Bacteroides thetaiotaomicron VPI-5482],5OLP_B Galacturonidase [Bacteroides thetaiotaomicron VPI-5482]

Swiss-Prot Hits      help

has no Swissprot hit.

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.000258 0.998998 0.000228 0.000171 0.000163 0.000144

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000000706_00826.