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CAZyme Information: MGYG000000720_01942

You are here: Home > Sequence: MGYG000000720_01942

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species
Lineage Bacteria; Verrucomicrobiota; Lentisphaeria; Victivallales; Victivallaceae; Victivallis;
CAZyme ID MGYG000000720_01942
CAZy Family GH39
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
621 69647.91 5.733
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000000720 3759035 MAG Kazakhstan Asia
Gene Location Start: 31437;  End: 33302  Strand: +

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000000720_01942.

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH39 67 236 3.6e-23 0.4733178654292343

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
COG3693 XynA 1.68e-05 57 192 67 183
Endo-1,4-beta-xylanase, GH35 family [Carbohydrate transport and metabolism].
pfam01229 Glyco_hydro_39 1.86e-05 102 273 126 312
Glycosyl hydrolases family 39.
COG3867 GanB 6.81e-05 42 240 69 286
Arabinogalactan endo-1,4-beta-galactosidase [Carbohydrate transport and metabolism].
COG1874 GanA 5.67e-04 24 110 18 106
Beta-galactosidase GanA [Carbohydrate transport and metabolism].
smart00633 Glyco_10 6.81e-04 59 140 3 96
Glycosyl hydrolase family 10.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
AVM44885.1 1.94e-171 21 620 26 612
QDU57372.1 8.64e-108 22 621 28 627
AVM44901.1 1.20e-49 3 533 5 546
QAT16636.1 3.93e-30 32 243 113 330
BBY95836.1 5.42e-30 25 241 34 278

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
4ZN2_A 7.06e-10 25 240 22 254
Glycosylhydrolase from Pseudomonas aeruginosa [Pseudomonas aeruginosa PAO1],4ZN2_B Glycosyl hydrolase from Pseudomonas aeruginosa [Pseudomonas aeruginosa PAO1],4ZN2_C Glycosyl hydrolase from Pseudomonas aeruginosa [Pseudomonas aeruginosa PAO1],4ZN2_D Glycosyl hydrolase from Pseudomonas aeruginosa [Pseudomonas aeruginosa PAO1]
5BX9_A 7.06e-10 25 240 22 254
Structureof PslG from Pseudomonas aeruginosa [Pseudomonas aeruginosa PAO1],5BXA_A Structure of PslG from Pseudomonas aeruginosa in complex with mannose [Pseudomonas aeruginosa PAO1]

Swiss-Prot Hits      help

has no Swissprot hit.

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.233313 0.744870 0.020927 0.000355 0.000261 0.000280

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000000720_01942.