CAZyme Information: MGYG000000722_00066

Basic Information

• Species: RC9 sp900545245
• Lineage: Bacteria; Bacteroidota; Bacteroidia; Bacteroidales; UBA932; RC9; RC9 sp900545245
• CAZyme ID: MGYG000000722_00066
• CAZy Family: GH78
• CAZyme Description: hypothetical protein

CAZyme Property

Protein Length	CGC	Molecular Weight	Isoelectric Point
865	MGYG000000722_1|CGC2	96228.12	5.0406

Genome Property

Genome Assembly ID	Genome Size	Genome Type	Country	Continent
MGYG000000722	2915024	MAG	Kazakhstan	Asia

• Gene Location: Start: 95104; End: 97701 Strand: +

Full Sequence      

MNRKITAAIVAALSVISCTEKSEENTGTRAEALDSSLWQESVWIAAADTPIVQGAIMGNN
EREADGASWFVSDLTNPENVKKAVWMTTGLGVYRIFINGAEVGEEFLKPGFTHYEKTRFS
FTYDITESFKKDAGDVNRLSAQATPGWWADKIITPYGHDGMIGSKPAFRGVLQITFADGR
IQNFGTNCTDWKVGVAGPVTHAAIFDGEEYDARIPQGYLTPEKLGVPEKFDEFKGNIFPS
DGAEVYLRRDLALKPQAAYVWKDVEDTGEKEYGKVVIAKEYAPGEEMIVKAGENLVIDFG
QNTAGIPEFEFSAAEGTVLTFLPSEILNDGNGAVSRGMDGPEGSIHRENLRAHKIGIRLI
YTFGADKGYVTYHPSSTFFGYRYASVSATAPVKIRSIVTLPVSSITKELETGTLTTGNTL
INQLISNTVWGQRSNYLSIPTDCPQRNERLGWTADTQVFAETGSFFANTDRFFHKWTRDI
RDTQTELGGYPGVAPYGQYGAAPTEMMRVGWADAGVIVPWVVWKQFGDNSIVDENWEAME
RFMNHVNETKYDHAALAAENGNDQYADWLSYEALESHAPKFDKDASGKRTLKKDYDEYWD
YLGASYWAIDAAMMRDMAKATGRDWKAYEAMATDAVAYLRENFLISDGSFRNAVFNTMQT
PALFALKNGLVEGQAKENMTARLRRNFETHDMCLQTGFLGTSILMPTLSENGMDDIAWNL
LFQRKNPSWLYSVDNGATTIWERWNSYTIESGMGPKGMNSFNHYAYGCVCEWLWKTAAGI
AADTEAPGFRHIIMKPVPDRRLGFLKASYKSAAGLITSEWKYDGDIWKWHFSIPEGSTAI
VFLPDGSAPKKYVSGSHSVKLTLGK

Enzyme Prediction     

No EC number prediction in MGYG000000722_00066.

CAZyme Signature Domains

Family	Start	End	Evalue	family coverage
GH78	292	843	1.4e-134	0.9861111111111112

CDD Domains     

Cdd ID	Domain	E-Value	qStart	qEnd	sStart	sEnd	Domain Description
pfam17389	Bac_rhamnosid6H	2.47e-97	421	776	13	339	Bacterial alpha-L-rhamnosidase 6 hairpin glycosidase domain. This family consists of bacterial rhamnosidase A and B enzymes. L-Rhamnose is abundant in biomass as a common constituent of glycolipids and glycosides, such as plant pigments, pectic polysaccharides, gums or biosurfactants. Some rhamnosides are important bioactive compounds. For example, terpenyl glycosides, the glycosidic precursor of aromatic terpenoids, act as important flavouring substances in grapes. Other rhamnosides act as cytotoxic rhamnosylated terpenoids, as signal substances in plants or play a role in the antigenicity of pathogenic bacteria.
pfam08531	Bac_rhamnosid_N	2.49e-27	80	221	3	140	Alpha-L-rhamnosidase N-terminal domain. This family consists of bacterial rhamnosidase A and B enzymes. This domain is probably involved in substrate recognition.
pfam17390	Bac_rhamnosid_C	1.17e-15	779	860	1	78	Bacterial alpha-L-rhamnosidase C-terminal domain. This family consists of bacterial rhamnosidase A and B enzymes. L-Rhamnose is abundant in biomass as a common constituent of glycolipids and glycosides, such as plant pigments, pectic polysaccharides, gums or biosurfactants. Some rhamnosides are important bioactive compounds. For example, terpenyl glycosides, the glycosidic precursor of aromatic terpenoids, act as important flavouring substances in grapes. Other rhamnosides act as cytotoxic rhamnosylated terpenoids, as signal substances in plants or play a role in the antigenicity of pathogenic bacteria.
pfam05592	Bac_rhamnosid	2.21e-12	296	398	9	100	Bacterial alpha-L-rhamnosidase concanavalin-like domain. This family consists of bacterial rhamnosidase A and B enzymes. L-Rhamnose is abundant in biomass as a common constituent of glycolipids and glycosides, such as plant pigments, pectic polysaccharides, gums or biosurfactants. Some rhamnosides are important bioactive compounds. For example, terpenyl glycosides, the glycosidic precursor of aromatic terpenoids, act as important flavouring substances in grapes. Other rhamnosides act as cytotoxic rhamnosylated terpenoids, as signal substances in plants or play a role in the antigenicity of pathogenic bacteria.

CAZyme Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End
BBK93107.1	0.0	2	859	11	866
QUT20979.1	0.0	2	859	3	858
QUR48396.1	0.0	2	859	11	866
QIX65068.1	0.0	2	859	11	866
QJE29828.1	0.0	2	859	11	866

PDB Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
3W5M_A	5.09e-103	78	863	314	1032	CrystalStructure of Streptomyces avermitilis alpha-L-rhamnosidase [Streptomyces avermitilis MA-4680 = NBRC 14893],3W5N_A Crystal Structure of Streptomyces avermitilis alpha-L-rhamnosidase complexed with L-rhamnose [Streptomyces avermitilis MA-4680 = NBRC 14893]
6GSZ_A	3.44e-73	88	857	152	861	Crystalstructure of native alfa-L-rhamnosidase from Aspergillus terreus [Aspergillus terreus]
6I60_A	2.65e-64	67	844	176	899	Structureof alpha-L-rhamnosidase from Dictyoglumus thermophilum [Dictyoglomus thermophilum H-6-12],6I60_B Structure of alpha-L-rhamnosidase from Dictyoglumus thermophilum [Dictyoglomus thermophilum H-6-12]

Swiss-Prot Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
Q82PP4	3.09e-102	78	844	314	995	Alpha-L-rhamnosidase OS=Streptomyces avermitilis (strain ATCC 31267 / DSM 46492 / JCM 5070 / NBRC 14893 / NCIMB 12804 / NRRL 8165 / MA-4680) OX=227882 GN=SAVERM_828 PE=1 SV=1
T2KNB2	8.48e-98	33	844	144	879	Alpha-L-rhamnosidase OS=Formosa agariphila (strain DSM 15362 / KCTC 12365 / LMG 23005 / KMM 3901 / M-2Alg 35-1) OX=1347342 GN=BN863_22090 PE=1 SV=2
P9WF03	4.94e-92	33	825	141	860	Alpha-L-rhamnosidase OS=Alteromonas sp. (strain LOR) OX=1537994 GN=LOR_34 PE=1 SV=1
T2KPL4	4.80e-45	33	855	141	918	Alpha-L-rhamnosidase OS=Formosa agariphila (strain DSM 15362 / KCTC 12365 / LMG 23005 / KMM 3901 / M-2Alg 35-1) OX=1347342 GN=BN863_22170 PE=2 SV=1

SignalP and Lipop Annotations

This protein is predicted as LIPO

Other	SP_Sec_SPI	LIPO_Sec_SPII	TAT_Tat_SPI	TATLIP_Sec_SPII	PILIN_Sec_SPIII
0.000002	0.002134	0.997897	0.000001	0.000001	0.000001

TMHMM  Annotations     

There is no transmembrane helices in MGYG000000722_00066.