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CAZyme Information: MGYG000000740_00840

You are here: Home > Sequence: MGYG000000740_00840

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species CAG-312 sp001917305
Lineage Bacteria; Verrucomicrobiota; Verrucomicrobiae; Opitutales; CAG-312; CAG-312; CAG-312 sp001917305
CAZyme ID MGYG000000740_00840
CAZy Family CBM67
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
811 91272.55 7.072
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000000740 2359825 MAG Kazakhstan Asia
Gene Location Start: 9556;  End: 11991  Strand: +

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000000740_00840.

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH78 312 808 4.4e-80 0.9742063492063492
CBM67 61 240 4.7e-40 0.9886363636363636

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
pfam17389 Bac_rhamnosid6H 4.70e-23 417 632 4 224
Bacterial alpha-L-rhamnosidase 6 hairpin glycosidase domain. This family consists of bacterial rhamnosidase A and B enzymes. L-Rhamnose is abundant in biomass as a common constituent of glycolipids and glycosides, such as plant pigments, pectic polysaccharides, gums or biosurfactants. Some rhamnosides are important bioactive compounds. For example, terpenyl glycosides, the glycosidic precursor of aromatic terpenoids, act as important flavouring substances in grapes. Other rhamnosides act as cytotoxic rhamnosylated terpenoids, as signal substances in plants or play a role in the antigenicity of pathogenic bacteria.
pfam08531 Bac_rhamnosid_N 6.27e-10 91 231 3 151
Alpha-L-rhamnosidase N-terminal domain. This family consists of bacterial rhamnosidase A and B enzymes. This domain is probably involved in substrate recognition.
PRK10340 ebgA 5.03e-06 65 148 95 178
cryptic beta-D-galactosidase subunit alpha; Reviewed
COG3408 GDB1 7.63e-05 509 762 339 624
Glycogen debranching enzyme (alpha-1,6-glucosidase) [Carbohydrate transport and metabolism].
pfam02837 Glyco_hydro_2_N 8.16e-05 48 149 37 135
Glycosyl hydrolases family 2, sugar binding domain. This family contains beta-galactosidase, beta-mannosidase and beta-glucuronidase activities and has a jelly-roll fold. The domain binds the sugar moiety during the sugar-hydrolysis reaction.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
SDT92885.1 5.82e-244 61 807 10 756
SDU02729.1 9.15e-234 57 808 12 767
QYY35421.1 3.21e-233 55 807 11 761
AHF89243.1 5.27e-222 57 807 15 790
QYM78626.1 1.41e-207 57 807 14 759

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
3CIH_A 5.64e-21 306 787 190 674
Crystalstructure of a putative alpha-rhamnosidase from Bacteroides thetaiotaomicron [Bacteroides thetaiotaomicron VPI-5482]
2OKX_A 8.30e-17 61 261 8 208
Crystalstructure of GH78 family rhamnosidase of Bacillus SP. GL1 AT 1.9 A [Bacillus sp. GL1],2OKX_B Crystal structure of GH78 family rhamnosidase of Bacillus SP. GL1 AT 1.9 A [Bacillus sp. GL1]
6I60_A 4.02e-13 66 808 166 893
Structureof alpha-L-rhamnosidase from Dictyoglumus thermophilum [Dictyoglomus thermophilum H-6-12],6I60_B Structure of alpha-L-rhamnosidase from Dictyoglumus thermophilum [Dictyoglomus thermophilum H-6-12]

Swiss-Prot Hits      help

has no Swissprot hit.

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.002782 0.919018 0.077172 0.000487 0.000284 0.000242

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000000740_00840.