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CAZyme Information: MGYG000000775_00840

You are here: Home > Sequence: MGYG000000775_00840

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Bifidobacterium sp900551485
Lineage Bacteria; Actinobacteriota; Actinomycetia; Actinomycetales; Bifidobacteriaceae; Bifidobacterium; Bifidobacterium sp900551485
CAZyme ID MGYG000000775_00840
CAZy Family GH3
CAZyme Description Beta-glucosidase BoGH3B
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
786 MGYG000000775_23|CGC1 85609.48 4.5502
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000000775 1891758 MAG Japan Asia
Gene Location Start: 2402;  End: 4762  Strand: -

Full Sequence      Download help

MEPSRVKGDI  NTMTQQLPYQ  DPNLPIPERV  SDLVGRMTLE  EKVGQMMQLD  ARDGDLESTI60
VDRHVGSILH  TAPEDLIRAA  DLVKNNTRLH  IPLLIGDDCI  HGYSFWPGAT  IFPSQLGMAV120
SWDPQLVRKA  ARATAEEVAP  TGVHWTFSPV  LCIGRDTRWG  RVDETFGEDP  YLIGEMASAM180
ISGYQKGAKA  GDLFAQDAIL  ACAKHFAGYS  ETQGGRDASE  ADLSHRKLAS  WFLPPFERAA240
REGCATFMLG  YESIDGVPVT  FNNWLLNQKL  RHDWGYTGTL  ITDWDNVGRS  VWEQHVKPDY300
AHASADAVRA  GNDLVMTTPQ  FYDGAIEAVR  SGLLDEKLLD  EAVARILTLK  FQLGLFENPR360
LPDEARIKAS  IGNEDHRRIN  LDIARESVAL  LKNNGALPFN  VNAAHRIAVV  GPLADDAQNQ420
LGDWAGSSGQ  VPWMKDGQPR  DRITTVLDAF  RQLAPQDCVV  TYARGANIID  LADDPEGAFF480
PDGQPRPKIA  VSADFDFDLL  SEAVTQSEQA  DLTVAVVGDV  VELVGEGCST  ATLELQGGQN540
KLLELLAQSA  ERTGKPLVVV  LMSSKPQVLP  PCIIGTNGVI  VDKAATQGVS  AFLWAPNPGM600
EGGRAIAEII  LGETEPTGRL  PITFPRHVGQ  LPVYYNQIRG  QHGNRYADLT  QDPAFAFGEG660
LAYTTFAYSD  LHITNGGENA  SFGINDTVHA  EVTLTNTGKR  AGTEIVQLYI  SDVVTSYTWA720
ERELKAFQRV  SLEPGESAVV  AFDLPVADCT  IVDADAQRIV  EPGEFKLLVG  HSSRLEDLQQ780
VSFTVA786

Enzyme Prediction      help

EC 3.2.1.21

CAZyme Signature Domains help

Created with Snap397811715719623527531435339343247151055058962866870774684316GH3
Family Start End Evalue family coverage
GH3 84 316 3.9e-70 0.9861111111111112

CDD Domains      download full data without filtering help

Created with Snap397811715719623527531435339343247151055058962866870774630784PRK1509837425BglX38349Glyco_hydro_318770PLN03080390663Glyco_hydro_3_C
Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
PRK15098 PRK15098 1.43e-171 30 784 38 763
beta-glucosidase BglX.
COG1472 BglX 2.77e-87 37 425 1 372
Periplasmic beta-glucosidase and related glycosidases [Carbohydrate transport and metabolism].
pfam00933 Glyco_hydro_3 3.39e-68 38 349 1 316
Glycosyl hydrolase family 3 N terminal domain.
PLN03080 PLN03080 4.41e-68 18 770 41 769
Probable beta-xylosidase; Provisional
pfam01915 Glyco_hydro_3_C 2.78e-45 390 663 3 216
Glycosyl hydrolase family 3 C-terminal domain. This domain is involved in catalysis and may be involved in binding beta-glucan. This domain is found associated with pfam00933.

CAZyme Hits      help

Created with Snap397811715719623527531435339343247151055058962866870774612786QHB63250.1|GH312786AJE06347.1|GH312786AXR42129.1|GH317786BAQ96830.1|GH317786AMK57051.1|GH3
Hit ID E-Value Query Start Query End Hit Start Hit End
QHB63250.1 0.0 12 786 2 776
AJE06347.1 0.0 12 786 17 791
AXR42129.1 0.0 12 786 2 776
BAQ96830.1 0.0 17 786 6 775
AMK57051.1 0.0 17 786 6 775

PDB Hits      download full data without filtering help

Created with Snap3978117157196235275314353393432471510550589628668707746157865Z9S_A307855XXL_A307855XXN_A307736R5I_A307736R5O_A
Hit ID E-Value Query Start Query End Hit Start Hit End Description
5Z9S_A 0.0 15 786 13 788
Functionaland Structural Characterization of a beta-Glucosidase Involved in Saponin Metabolism from Intestinal Bacteria [Bifidobacterium longum],5Z9S_B Functional and Structural Characterization of a beta-Glucosidase Involved in Saponin Metabolism from Intestinal Bacteria [Bifidobacterium longum]
5XXL_A 6.25e-133 30 785 14 751
Crystalstructure of GH3 beta-glucosidase from Bacteroides thetaiotaomicron [Bacteroides thetaiotaomicron VPI-5482],5XXL_B Crystal structure of GH3 beta-glucosidase from Bacteroides thetaiotaomicron [Bacteroides thetaiotaomicron VPI-5482],5XXM_A Crystal structure of GH3 beta-glucosidase from Bacteroides thetaiotaomicron in complex with gluconolactone [Bacteroides thetaiotaomicron VPI-5482],5XXM_B Crystal structure of GH3 beta-glucosidase from Bacteroides thetaiotaomicron in complex with gluconolactone [Bacteroides thetaiotaomicron VPI-5482]
5XXN_A 3.43e-132 30 785 14 751
CrystalStructure of mutant (D286N) beta-glucosidase from Bacteroides thetaiotaomicron in complex with sophorose [Bacteroides thetaiotaomicron VPI-5482],5XXN_B Crystal Structure of mutant (D286N) beta-glucosidase from Bacteroides thetaiotaomicron in complex with sophorose [Bacteroides thetaiotaomicron VPI-5482],5XXO_A Crystal structure of mutant (D286N) GH3 beta-glucosidase from Bacteroides thetaiotaomicron in complex with sophorotriose [Bacteroides thetaiotaomicron VPI-5482],5XXO_B Crystal structure of mutant (D286N) GH3 beta-glucosidase from Bacteroides thetaiotaomicron in complex with sophorotriose [Bacteroides thetaiotaomicron VPI-5482]
6R5I_A 2.49e-131 30 773 7 722
ChainA, Periplasmic beta-glucosidase [Pseudomonas aeruginosa PAO1],6R5I_B Chain B, Periplasmic beta-glucosidase [Pseudomonas aeruginosa PAO1],6R5N_A Chain A, Periplasmic beta-glucosidase [Pseudomonas aeruginosa PAO1],6R5N_B Chain B, Periplasmic beta-glucosidase [Pseudomonas aeruginosa PAO1]
6R5O_A 1.37e-130 30 773 7 722
ChainA, Periplasmic beta-glucosidase [Pseudomonas aeruginosa PAO1],6R5O_B Chain B, Periplasmic beta-glucosidase [Pseudomonas aeruginosa PAO1],6R5R_B Chain B, Periplasmic beta-glucosidase [Pseudomonas aeruginosa PAO1],6R5T_A Chain A, Periplasmic beta-glucosidase [Pseudomonas aeruginosa PAO1],6R5T_B Chain B, Periplasmic beta-glucosidase [Pseudomonas aeruginosa PAO1],6R5U_A Chain A, Periplasmic beta-glucosidase [Pseudomonas aeruginosa PAO1],6R5U_B Chain B, Periplasmic beta-glucosidase [Pseudomonas aeruginosa PAO1],6R5V_A Chain A, Periplasmic beta-glucosidase [Pseudomonas aeruginosa PAO1],6R5V_B Chain B, Periplasmic beta-glucosidase [Pseudomonas aeruginosa PAO1]

Swiss-Prot Hits      download full data without filtering help

Created with Snap397811715719623527531435339343247151055058962866870774630773sp|Q56078|BGLX_SALTY26785sp|T2KMH0|PLH24_FORAG30773sp|P33363|BGLX_ECOLI30771sp|Q23892|GLUA_DICDI12783sp|T2KMH9|PLH34_FORAG
Hit ID E-Value Query Start Query End Hit Start Hit End Description
Q56078 4.13e-117 30 773 38 754
Periplasmic beta-glucosidase OS=Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720) OX=99287 GN=bglX PE=3 SV=2
T2KMH0 1.06e-116 26 785 33 722
Beta-xylosidase OS=Formosa agariphila (strain DSM 15362 / KCTC 12365 / LMG 23005 / KMM 3901 / M-2Alg 35-1) OX=1347342 GN=BN863_22130 PE=1 SV=1
P33363 6.15e-116 30 773 38 754
Periplasmic beta-glucosidase OS=Escherichia coli (strain K12) OX=83333 GN=bglX PE=3 SV=2
Q23892 3.11e-101 30 771 80 813
Lysosomal beta glucosidase OS=Dictyostelium discoideum OX=44689 GN=gluA PE=1 SV=2
T2KMH9 1.37e-85 12 783 22 752
Putative beta-xylosidase OS=Formosa agariphila (strain DSM 15362 / KCTC 12365 / LMG 23005 / KMM 3901 / M-2Alg 35-1) OX=1347342 GN=BN863_22230 PE=2 SV=1

SignalP and Lipop Annotations help

This protein is predicted as OTHER

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
1.000044 0.000000 0.000000 0.000000 0.000000 0.000000

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000000775_00840.