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CAZyme Information: MGYG000000777_01237

You are here: Home > Sequence: MGYG000000777_01237

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Collinsella sp900544135
Lineage Bacteria; Actinobacteriota; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; Collinsella sp900544135
CAZyme ID MGYG000000777_01237
CAZy Family CBM32
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
1810 MGYG000000777_10|CGC1 193978.45 4.6058
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000000777 2148033 MAG Japan Asia
Gene Location Start: 27411;  End: 32843  Strand: +

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000000777_01237.

CAZyme Signature Domains help

Family Start End Evalue family coverage
CBM32 116 231 2.1e-20 0.7983870967741935

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
pfam00754 F5_F8_type_C 2.68e-17 108 244 1 127
F5/8 type C domain. This domain is also known as the discoidin (DS) domain family.
pfam09479 Flg_new 9.61e-14 1664 1726 2 65
Listeria-Bacteroides repeat domain (List_Bact_rpt). This model describes a conserved core region of about 43 residues, which occurs in at least two families of tandem repeats. These include 78-residue repeats which occur from 2 to 15 times in some proteins of Bacteroides forsythus ATCC 43037, and 70-residue repeats found in families of internalins of Listeria species. Single copies are found in proteins of Fibrobacter succinogenes, Geobacter sulfurreducens, and a few other bacteria.
pfam13385 Laminin_G_3 2.26e-08 1220 1337 17 150
Concanavalin A-like lectin/glucanases superfamily. This domain belongs to the Concanavalin A-like lectin/glucanases superfamily.
cd00057 FA58C 9.43e-07 114 230 17 134
Substituted updates: Jan 31, 2002
NF033189 internalin_A 1.40e-06 1643 1807 617 794
class 1 internalin InlA. Internalins, as found in the intracellular human pathogen Listeria monocytogenes, are paralogous surface or secreted proteins with an N-terminal signal peptide, leucine-rich repeats, and usually a C-terminal LPXTG processing and cell surface anchoring site. See PMID:17764999 for a general discussion of internalins. Members of this family are internalin A (InlA), a class 1 (LPXTG-type) internalin.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
QCC62414.1 0.0 257 1735 26 1571
QQA11075.1 2.45e-187 231 1299 87 1166
BAB80970.1 9.01e-187 231 1299 87 1166
ABG83191.1 1.73e-186 231 1299 87 1166
AOY54034.1 1.73e-186 231 1299 87 1166

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
2Y5P_A 4.58e-06 1664 1725 6 68
B-repeatof Listeria monocytogenes InlB (internalin B) [Listeria monocytogenes EGD],2Y5P_B B-repeat of Listeria monocytogenes InlB (internalin B) [Listeria monocytogenes EGD],2Y5P_C B-repeat of Listeria monocytogenes InlB (internalin B) [Listeria monocytogenes EGD],2Y5P_D B-repeat of Listeria monocytogenes InlB (internalin B) [Listeria monocytogenes EGD]

Swiss-Prot Hits      help

has no Swissprot hit.

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.000415 0.998652 0.000217 0.000259 0.000225 0.000196

TMHMM  Annotations      download full data without filtering help

start end
1783 1805