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CAZyme Information: MGYG000000782_01310

You are here: Home > Sequence: MGYG000000782_01310

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Phascolarctobacterium_A sp900541915
Lineage Bacteria; Firmicutes_C; Negativicutes; Acidaminococcales; Acidaminococcaceae; Phascolarctobacterium_A; Phascolarctobacterium_A sp900541915
CAZyme ID MGYG000000782_01310
CAZy Family GH171
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
401 MGYG000000782_12|CGC1 44792.45 5.1656
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000000782 1798867 MAG China Asia
Gene Location Start: 16360;  End: 17565  Strand: +

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000000782_01310.

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH171 47 400 2.9e-124 0.9971830985915493

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
pfam07075 DUF1343 2.10e-171 48 400 1 362
Protein of unknown function (DUF1343). This family consists of several hypothetical bacterial proteins of around 400 residues in length. The function of this family is unknown.
COG3876 YbbC 6.12e-142 9 400 8 409
Uncharacterized conserved protein YbbC, DUF1343 family [Function unknown].
cd16436 beta_Kdo_transferase 0.006 74 175 22 130
beta-3-deoxy-D-manno-oct-2-ulosonic acid (Kdo)-transferase. KpsC and KpsS are retaining beta-3-deoxy-D-manno-oct-2-ulosonic acid (Kdo)-transferases. They are part of the ATP-binding cassette transporter dependent capsular polysaccharides (CPSs) synthesis pathway, one of two CPS synthesis pathways present in Escherichia coli. The poly-Kdo linker is thought to be the common feature of CPSs synthesized via this pathway. CPSs are high-molecular-mass cell-surface polysaccharides that are important virulence factors for many pathogenic bacteria.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
QTV78142.1 4.47e-169 9 401 7 405
QNP78041.1 1.12e-158 28 401 37 410
BBG63384.1 1.59e-158 28 401 37 410
AIF54236.1 4.71e-121 30 401 51 425
AJQ29948.1 1.53e-118 30 400 48 421

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
4K05_A 7.35e-90 27 401 12 399
Crystalstructure of a DUF1343 family protein (BF0371) from Bacteroides fragilis NCTC 9343 at 1.65 A resolution [Bacteroides fragilis NCTC 9343],4K05_B Crystal structure of a DUF1343 family protein (BF0371) from Bacteroides fragilis NCTC 9343 at 1.65 A resolution [Bacteroides fragilis NCTC 9343]
4JJA_A 2.26e-50 28 276 6 257
Crystalstructure of a DUF1343 family protein (BF0379) from Bacteroides fragilis NCTC 9343 at 1.30 A resolution [Bacteroides fragilis NCTC 9343]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
P40407 7.37e-105 19 400 28 414
Uncharacterized protein YbbC OS=Bacillus subtilis (strain 168) OX=224308 GN=ybbC PE=3 SV=1

SignalP and Lipop Annotations help

This protein is predicted as LIPO

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.000365 0.339074 0.660137 0.000141 0.000143 0.000127

TMHMM  Annotations      download full data without filtering help

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