logo
sublogo
You are browsing environment: HUMAN GUT
help

CAZyme Information: MGYG000000788_01362

You are here: Home > Sequence: MGYG000000788_01362

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Bacteroides pyogenes
Lineage Bacteria; Bacteroidota; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; Bacteroides pyogenes
CAZyme ID MGYG000000788_01362
CAZy Family CBM50
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
586 MGYG000000788_27|CGC1 66872.72 9.05
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000000788 2895183 MAG China Asia
Gene Location Start: 906;  End: 2666  Strand: -

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000000788_01362.

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
PRK06347 PRK06347 3.22e-09 32 200 408 591
1,4-beta-N-acetylmuramoylhydrolase.
cd00118 LysM 5.44e-09 32 73 3 45
Lysin Motif is a small domain involved in binding peptidoglycan. LysM, a small globular domain with approximately 40 amino acids, is a widespread protein module involved in binding peptidoglycan in bacteria and chitin in eukaryotes. The domain was originally identified in enzymes that degrade bacterial cell walls, but proteins involved in many other biological functions also contain this domain. It has been reported that the LysM domain functions as a signal for specific plant-bacteria recognition in bacterial pathogenesis. Many of these enzymes are modular and are composed of catalytic units linked to one or several repeats of LysM domains. LysM domains are found in bacteria and eukaryotes.
smart00257 LysM 1.03e-08 32 73 2 44
Lysin motif.
pfam01476 LysM 1.72e-08 32 74 1 43
LysM domain. The LysM (lysin motif) domain is about 40 residues long. It is found in a variety of enzymes involved in bacterial cell wall degradation. This domain may have a general peptidoglycan binding function. The structure of this domain is known.
cd00118 LysM 1.87e-08 84 128 1 45
Lysin Motif is a small domain involved in binding peptidoglycan. LysM, a small globular domain with approximately 40 amino acids, is a widespread protein module involved in binding peptidoglycan in bacteria and chitin in eukaryotes. The domain was originally identified in enzymes that degrade bacterial cell walls, but proteins involved in many other biological functions also contain this domain. It has been reported that the LysM domain functions as a signal for specific plant-bacteria recognition in bacterial pathogenesis. Many of these enzymes are modular and are composed of catalytic units linked to one or several repeats of LysM domains. LysM domains are found in bacteria and eukaryotes.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
AAO75684.1 0.0 1 586 1 588
ALJ41640.1 0.0 1 586 1 588
QMW87623.1 0.0 1 586 1 588
QUT38924.1 0.0 1 586 1 588
QUT71422.1 0.0 1 586 1 588

PDB Hits      help

has no PDB hit.

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
P37710 2.45e-06 32 128 633 736
Autolysin OS=Enterococcus faecalis (strain ATCC 700802 / V583) OX=226185 GN=EF_0799 PE=1 SV=2
P44493 4.12e-06 32 191 294 419
Probable N-acetylmuramoyl-L-alanine amidase AmiB OS=Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd) OX=71421 GN=amiB PE=3 SV=1

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.000256 0.999149 0.000171 0.000146 0.000135 0.000125

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000000788_01362.