CAZyme Information: MGYG000000789_01078

Basic Information

• Species: Collinsella sp002232035
• Lineage: Bacteria; Actinobacteriota; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; Collinsella sp002232035
• CAZyme ID: MGYG000000789_01078
• CAZy Family: GH106
• CAZyme Description: hypothetical protein

CAZyme Property

Protein Length	CGC	Molecular Weight	Isoelectric Point
863	MGYG000000789_23|CGC1	93665.77	4.5889

Genome Property

Genome Assembly ID	Genome Size	Genome Type	Country	Continent
MGYG000000789	2053989	MAG	China	Asia

• Gene Location: Start: 19253; End: 21844 Strand: +

Full Sequence      

MTAYYQQVLEGTYDNHVLPFLWMKGESHKTIAEYLEKIAGADIHEVCLESRPHPDFCGEG
WWRDLRFVIDECKQLGLKLWILDDAHFPTGFANGVVKEAVPELRKIVLTHRTFDIVGPTS
AASIALANMLDKTERFHGVTFMQDGSPVDVAYRVIDDVDGNPSRLVFDAPAGLTQACVMF
TSGKTSYNEDYINMVDRASVAQLIDAVYEPHFEHLGDEFGKTILGFFSDEPGFANEKGTT
GPDGISDTLIGKATAPLPWSAELERRLRAALGERYLAELPHLWDREPAGAHVRHVYMDIA
STLYKECFCDQLGDWCRARGVQYIGHVIEDKDCHARLGVGAGHYFRAVGGQDMAGVDIVI
NQLVPGMDRGLHSYGRGVWDLEFYNYVLPKLGSSAAHLDPKKQGRCMAEVFGAFGWHEGL
REMKWIADHFLVRGVNWFVPHAFSMAAFPDWDCPPHFYAHGQNPQIAHFGQLMSYMNRTA
SLLSGGRATAPVALLYHADAEWAGEANFMQHAASELLRAQVDFDIVPAEAFEDAGRYAIE
IAADGSGFSVNGQAYRCLVMPGAEFVGGAVLDFAARAAAAGVAVYALDELPNKRYDGDTA
GREGFASLDAAAVADIKLLATTELADTLANTGMQTVVCAEPQPWLRALRYERAGESYLML
VNEHPKQGISTQIALADGTPVAGARLDLLNGTEPAAFDGTLELAPYESCIVVLGATGSVA
VATAEDEATCVDGPWAVAFSAPGTDAFGESVELADLRDLSSAEFPGKAGTFRYRASFVLG
EAATRTVIDLGEVFETATVTLDGKSLGTRICPPYRFEAGALLAGEHALTIDIINTLDHAV
PDMFGMTEPSDPSGLLGPVRVLG

Enzyme Prediction     

No EC number prediction in MGYG000000789_01078.

CAZyme Signature Domains

Family	Start	End	Evalue	family coverage
GH106	28	861	5.2e-69	0.9635922330097088

CDD Domains     

Cdd ID	Domain	E-Value	qStart	qEnd	sStart	sEnd	Domain Description
pfam17132	Glyco_hydro_106	8.47e-05	393	563	566	732	alpha-L-rhamnosidase.

CAZyme Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End
AZH68834.1	0.0	1	863	1	863
ATP54541.1	0.0	13	863	4	850
QNM10672.1	3.52e-316	1	861	1	832
AGF57028.1	2.56e-249	8	862	7	846
ANY67834.1	5.65e-209	1	859	1	875

PDB Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
6Q2F_A	1.97e-08	664	862	932	1139	Structureof Rhamnosidase from Novosphingobium sp. PP1Y [Novosphingobium sp. PP1Y]

Swiss-Prot Hits     

has no Swissprot hit.

SignalP and Lipop Annotations

This protein is predicted as OTHER

Other	SP_Sec_SPI	LIPO_Sec_SPII	TAT_Tat_SPI	TATLIP_Sec_SPII	PILIN_Sec_SPIII
1.000050	0.000000	0.000000	0.000000	0.000000	0.000000

TMHMM  Annotations     

There is no transmembrane helices in MGYG000000789_01078.