logo
sublogo
You are browsing environment: HUMAN GUT
help

CAZyme Information: MGYG000000808_00779

You are here: Home > Sequence: MGYG000000808_00779

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Dysosmobacter sp900556925
Lineage Bacteria; Firmicutes_A; Clostridia; Oscillospirales; Oscillospiraceae; Dysosmobacter; Dysosmobacter sp900556925
CAZyme ID MGYG000000808_00779
CAZy Family GH18
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
556 60006.03 4.2393
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000000808 1884951 MAG China Asia
Gene Location Start: 2444;  End: 4114  Strand: +

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000000808_00779.

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH18 241 541 7.6e-28 0.777027027027027

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
cd02874 GH18_CFLE_spore_hydrolase 1.78e-30 301 554 81 313
Cortical fragment-lytic enzyme (CFLE) is a peptidoglycan hydrolase involved in bacterial endospore germination. CFLE is expressed as an inactive preprotein (called SleB) in the forespore compartment of sporulating cells. SleB translocates across the forespore inner membrane and is deposited as a mature enzyme in the cortex layer of the spore. As part of a sensory mechanism capable of initiating germination, CFLE degrades a spore-specific peptidoglycan constituent called muramic-acid delta-lactam that comprises the outer cortex. CFLE has a C-terminal glycosyl hydrolase family 18 (GH18) catalytic domain as well as two N-terminal LysM peptidoglycan-binding domains. In addition to SleB, this family includes YaaH, YdhD, and YvbX from Bacillus subtilis.
COG3858 YaaH 7.34e-22 294 541 178 408
Spore germination protein YaaH [Cell cycle control, cell division, chromosome partitioning].
cd06549 GH18_trifunctional 9.75e-20 294 543 75 293
GH18 domain of an uncharacterized family of bacterial proteins, which share a common three-domain architecture: an N-terminal glycosyl hydrolase family 18 (GH18) domain, a glycosyl transferase family 2 domain, and a C-terminal polysaccharide deacetylase domain.
pfam00704 Glyco_hydro_18 3.49e-13 300 541 81 305
Glycosyl hydrolases family 18.
smart00636 Glyco_18 1.92e-12 244 538 32 329
Glyco_18 domain.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
BAK99492.1 2.67e-229 1 555 21 569
QNL45580.1 1.65e-224 29 551 21 546
QUO37985.1 3.61e-185 1 555 1 551
QIB69198.1 4.30e-147 2 544 6 542
QOX64072.1 1.59e-141 2 548 3 552

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
3CZ8_A 8.04e-13 301 540 89 308
ChainA, Putative sporulation-specific glycosylase ydhD [Bacillus subtilis subsp. subtilis str. 168],3CZ8_B Chain B, Putative sporulation-specific glycosylase ydhD [Bacillus subtilis subsp. subtilis str. 168]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
O05495 3.68e-13 301 549 181 409
Putative sporulation-specific glycosylase YdhD OS=Bacillus subtilis (strain 168) OX=224308 GN=ydhD PE=1 SV=2
P37531 2.67e-10 301 541 186 409
Cortical fragment-lytic enzyme OS=Bacillus subtilis (strain 168) OX=224308 GN=sleL PE=1 SV=2
P38538 1.05e-08 1 150 31 184
Surface layer protein OS=Brevibacillus choshinensis OX=54911 PE=1 SV=1
P06546 1.22e-07 1 150 1 156
Middle cell wall protein OS=Brevibacillus brevis (strain 47 / JCM 6285 / NBRC 100599) OX=358681 GN=BBR47_54160 PE=4 SV=4
P38536 4.09e-07 50 212 1702 1857
Amylopullulanase OS=Thermoanaerobacterium thermosulfurigenes OX=33950 GN=amyB PE=3 SV=2

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.000311 0.998833 0.000217 0.000231 0.000207 0.000188

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000000808_00779.