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CAZyme Information: MGYG000000815_03170

You are here: Home > Sequence: MGYG000000815_03170

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Dysgonomonas capnocytophagoides
Lineage Bacteria; Bacteroidota; Bacteroidia; Bacteroidales; Dysgonomonadaceae; Dysgonomonas; Dysgonomonas capnocytophagoides
CAZyme ID MGYG000000815_03170
CAZy Family GH28
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
467 MGYG000000815_8|CGC5 53373.34 5.7457
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000000815 4510901 MAG China Asia
Gene Location Start: 262704;  End: 264107  Strand: -

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000000815_03170.

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH28 190 448 4.2e-42 0.7415384615384616

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
COG5434 Pgu1 5.86e-09 197 324 244 344
Polygalacturonase [Carbohydrate transport and metabolism].
pfam00295 Glyco_hydro_28 2.69e-08 178 448 51 307
Glycosyl hydrolases family 28. Glycosyl hydrolase family 28 includes polygalacturonase EC:3.2.1.15 as well as rhamnogalacturonase A(RGase A), EC:3.2.1.-. These enzymes are important in cell wall metabolism.
PLN02218 PLN02218 1.55e-04 222 448 200 412
polygalacturonase ADPG
PLN02793 PLN02793 4.26e-04 214 380 227 396
Probable polygalacturonase
pfam13229 Beta_helix 5.03e-04 216 327 48 151
Right handed beta helix region. This region contains a parallel beta helix region that shares some similarity with Pectate lyases.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
AII64640.1 1.75e-199 23 467 19 461
QJR77942.1 3.91e-199 23 467 22 464
QUT85436.1 1.42e-198 23 467 19 461
QJR54182.1 1.58e-198 23 467 22 464
QJR61020.1 1.58e-198 23 467 22 464

PDB Hits      help

has no PDB hit.

Swiss-Prot Hits      help

has no Swissprot hit.

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.000354 0.998913 0.000198 0.000167 0.000164 0.000159

TMHMM  Annotations      download full data without filtering help

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