dbCAN-seq: a database of CAZyme sequence and annotation

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CAZyme Information: MGYG000000825_01807

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Species

Duncaniella sp900544535

Lineage

Bacteria; Bacteroidota; Bacteroidia; Bacteroidales; Muribaculaceae; Duncaniella; Duncaniella sp900544535

CAZyme ID

MGYG000000825_01807

CAZy Family

PL1

CAZyme Description

hypothetical protein

CAZyme Property

Protein Length	CGC	Molecular Weight	Isoelectric Point
795		86451.14	4.8413

Genome Property

Genome Assembly ID	Genome Size	Genome Type	Country	Continent
MGYG000000825	2700478	MAG	China	Asia

Gene Location

Start: 18290; End: 20677 Strand: +

No EC number prediction in MGYG000000825_01807.

Family	Start	End	Evalue	family coverage
PL1	469	640	1.2e-37	0.8366336633663366

Cdd ID	Domain	E-Value	qStart	qEnd	sStart	sEnd	Domain Description
COG3866	PelB	7.72e-48	333	756	2	345	Pectate lyase [Carbohydrate transport and metabolism].
smart00656	Amb_all	1.66e-26	466	638	5	186	Amb_all domain.
pfam00544	Pec_lyase_C	1.51e-16	514	638	80	211	Pectate lyase. This enzyme forms a right handed beta helix structure. Pectate lyase is an enzyme involved in the maceration and soft rotting of plant tissue.

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End
QCD40816.1	0.0	207	795	1	589
QCP73706.1	0.0	207	795	1	589
QUT73893.1	1.30e-222	271	794	19	542
QNT67442.1	3.07e-214	196	794	29	613
QOR18408.1	4.29e-209	246	786	51	580

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
3VMV_A	4.57e-25	426	638	33	246	Crystalstructure of pectate lyase Bsp165PelA from Bacillus sp. N165 [Bacillus sp. N16-5],3VMW_A Crystal structure of pectate lyase Bsp165PelA from Bacillus sp. N165 in complex with trigalacturonate [Bacillus sp. N16-5]
1AIR_A	2.03e-18	399	754	22	342	ChainA, PECTATE LYASE C [Dickeya chrysanthemi],1O88_A Chain A, Pectate Lyase C [Dickeya chrysanthemi],1O8D_A Chain A, PECTATE LYASE C [Dickeya chrysanthemi],1O8E_A Chain A, PECTATE LYASE C [Dickeya chrysanthemi],1O8F_A Chain A, PECTATE LYASE C [Dickeya chrysanthemi],1O8G_A Chain A, PECTATE LYASE C [Dickeya chrysanthemi],1O8H_A Chain A, PECTATE LYASE C [Dickeya chrysanthemi],1O8I_A Chain A, PECTATE LYASE C [Dickeya chrysanthemi],1O8J_A Chain A, PECTATE LYASE C [Dickeya chrysanthemi],1O8K_A Chain A, PECTATE LYASE C [Dickeya chrysanthemi],1O8L_A Chain A, PECTATE LYASE C [Dickeya chrysanthemi],1O8M_A Chain A, PECTATE LYASE C [Dickeya chrysanthemi],1PLU_A Chain A, Protein (pectate Lyase C) [Dickeya chrysanthemi],2PEC_A Chain A, PECTATE LYASE C [Dickeya chrysanthemi]
2EWE_A	4.91e-18	399	754	22	342	ChainA, Pectate lyase C [Dickeya chrysanthemi]
1VBL_A	1.24e-16	473	638	130	330	Structureof the thermostable pectate lyase PL 47 [Bacillus sp. TS-47]
3ZSC_A	8.72e-15	478	623	71	221	Catalyticfunction and substrate recognition of the pectate lyase from Thermotoga maritima [Thermotoga maritima]

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
Q65DC2	1.59e-22	417	647	57	281	Pectate trisaccharide-lyase OS=Bacillus licheniformis (strain ATCC 14580 / DSM 13 / JCM 2505 / CCUG 7422 / NBRC 12200 / NCIMB 9375 / NCTC 10341 / NRRL NRS-1264 / Gibson 46) OX=279010 GN=BLi04129 PE=3 SV=1
B1B6T1	1.59e-22	417	647	57	281	Pectate trisaccharide-lyase OS=Bacillus sp. OX=1409 GN=pel PE=1 SV=1
Q8GCB2	1.59e-22	417	647	57	281	Pectate trisaccharide-lyase OS=Bacillus licheniformis OX=1402 GN=pelA PE=1 SV=1
P11073	1.43e-17	399	754	44	364	Pectate lyase C OS=Dickeya chrysanthemi OX=556 GN=pelC PE=1 SV=1
Q5AVN4	1.53e-16	473	651	96	277	Pectate lyase A OS=Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) OX=227321 GN=plyA PE=1 SV=1

Other	SP_Sec_SPI	LIPO_Sec_SPII	TAT_Tat_SPI	TATLIP_Sec_SPII	PILIN_Sec_SPIII
0.000228	0.999158	0.000165	0.000153	0.000137	0.000129

There is no transmembrane helices in MGYG000000825_01807.