dbCAN-seq: a database of CAZyme sequence and annotation

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CAZyme Information: MGYG000000837_01793

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Basic Information help

Species

Dysosmobacter sp900544105

Lineage

Bacteria; Firmicutes_A; Clostridia; Oscillospirales; Oscillospiraceae; Dysosmobacter; Dysosmobacter sp900544105

CAZyme ID

MGYG000000837_01793

CAZy Family

GH18

CAZyme Description

hypothetical protein

CAZyme Property

Protein Length	CGC	Molecular Weight	Isoelectric Point
490		52623.58	5.3374

Genome Property

Genome Assembly ID	Genome Size	Genome Type	Country	Continent
MGYG000000837	2171635	MAG	China	Asia

Gene Location

Start: 2852; End: 4324 Strand: +

Full Sequence Download help

Enzyme Prediction help

No EC number prediction in MGYG000000837_01793.

CAZyme Signature Domains help

Family	Start	End	Evalue	family coverage
GH18	244	468	2.5e-17	0.7297297297297297

CDD Domains download full data without filtering help

Cdd ID	Domain	E-Value	qStart	qEnd	sStart	sEnd	Domain Description
NF033190	inl_like_NEAT_1	1.82e-15	32	199	582	748	NEAT domain-containing leucine-rich repeat protein. Members of this family have an N-terminal NEAT (near transporter) domain often associated with iron transport, followed by a leucine-rich repeat region with significant sequence similarity to the internalins of Listeria monocytogenes. However, since Bacillus cereus (from which this protein was described, in PMID:16978259) is not considered an intracellular pathogen, and the function may be iron transport rather than internalization, applying the name "internalin" to this family probably would be misleading.
cd02874	GH18_CFLE_spore_hydrolase	1.19e-07	301	482	104	306	Cortical fragment-lytic enzyme (CFLE) is a peptidoglycan hydrolase involved in bacterial endospore germination. CFLE is expressed as an inactive preprotein (called SleB) in the forespore compartment of sporulating cells. SleB translocates across the forespore inner membrane and is deposited as a mature enzyme in the cortex layer of the spore. As part of a sensory mechanism capable of initiating germination, CFLE degrades a spore-specific peptidoglycan constituent called muramic-acid delta-lactam that comprises the outer cortex. CFLE has a C-terminal glycosyl hydrolase family 18 (GH18) catalytic domain as well as two N-terminal LysM peptidoglycan-binding domains. In addition to SleB, this family includes YaaH, YdhD, and YvbX from Bacillus subtilis.
pfam00395	SLH	2.42e-06	93	133	1	42	S-layer homology domain.
pfam00395	SLH	9.21e-06	32	71	1	40	S-layer homology domain.
COG3858	YaaH	3.63e-05	300	482	207	411	Spore germination protein YaaH [Cell cycle control, cell division, chromosome partitioning].

CAZyme Hits help

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End
BCK84377.1	1.74e-118	1	486	1	498
QCI59678.1	7.52e-102	12	479	11	491
QNL44109.1	4.29e-83	17	482	13	489
QIB69198.1	8.41e-44	4	473	3	530
QAT42616.1	2.69e-41	6	474	5	531

PDB Hits help

has no PDB hit.

Swiss-Prot Hits download full data without filtering help

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
P38536	2.71e-15	31	205	1681	1857	Amylopullulanase OS=Thermoanaerobacterium thermosulfurigenes OX=33950 GN=amyB PE=3 SV=2
P38535	1.67e-14	31	205	907	1083	Exoglucanase XynX OS=Acetivibrio thermocellus OX=1515 GN=xynX PE=3 SV=1
P19424	6.41e-14	32	206	41	217	Endoglucanase OS=Bacillus sp. (strain KSM-635) OX=1415 PE=1 SV=1
P22258	1.85e-06	93	201	31	143	Cell surface protein OS=Thermoanaerobacter kivui OX=2325 PE=1 SV=1

SignalP and Lipop Annotations help

This protein is predicted as SP

Other	SP_Sec_SPI	LIPO_Sec_SPII	TAT_Tat_SPI	TATLIP_Sec_SPII	PILIN_Sec_SPIII
0.000276	0.998932	0.000259	0.000176	0.000172	0.000156

TMHMM Annotations help

There is no transmembrane helices in MGYG000000837_01793.