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CAZyme Information: MGYG000000839_02039

You are here: Home > Sequence: MGYG000000839_02039

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Clostridium sp900540255
Lineage Bacteria; Firmicutes_A; Clostridia; Clostridiales; Clostridiaceae; Clostridium; Clostridium sp900540255
CAZyme ID MGYG000000839_02039
CAZy Family GH73
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
1035 MGYG000000839_30|CGC1 117057.19 4.9627
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000000839 2735655 MAG China Asia
Gene Location Start: 13262;  End: 16369  Strand: +

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000000839_02039.

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH73 391 502 9.3e-23 0.9375

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
COG5492 YjdB 2.66e-23 632 910 24 323
Uncharacterized conserved protein YjdB, contains Ig-like domain [General function prediction only].
COG5492 YjdB 1.82e-22 679 956 26 323
Uncharacterized conserved protein YjdB, contains Ig-like domain [General function prediction only].
COG5492 YjdB 2.45e-21 768 1002 26 323
Uncharacterized conserved protein YjdB, contains Ig-like domain [General function prediction only].
COG4193 LytD 1.46e-19 337 501 50 223
Beta- N-acetylglucosaminidase [Carbohydrate transport and metabolism].
COG5492 YjdB 7.20e-18 798 939 11 157
Uncharacterized conserved protein YjdB, contains Ig-like domain [General function prediction only].

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
QAS62016.1 1.34e-147 132 628 74 583
AYE33874.1 1.34e-147 132 628 74 583
ASW42466.1 1.71e-140 133 610 131 669
QBJ74559.1 1.28e-139 132 610 74 566
SLK13348.1 1.28e-139 132 610 74 566

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
4Q2W_A 1.86e-27 210 500 29 276
CrystalStructure of pneumococcal peptidoglycan hydrolase LytB [Streptococcus pneumoniae TIGR4]
4PI7_A 2.27e-06 358 501 55 206
ChainA, Autolysin E [Staphylococcus aureus subsp. aureus Mu50],4PI9_A Chain A, Autolysin E [Staphylococcus aureus subsp. aureus Mu50],4PIA_A Chain A, Autolysin E [Staphylococcus aureus subsp. aureus Mu50]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
P59205 1.85e-25 210 507 397 651
Putative endo-beta-N-acetylglucosaminidase OS=Streptococcus pneumoniae serotype 4 (strain ATCC BAA-334 / TIGR4) OX=170187 GN=lytB PE=1 SV=1
P59206 2.20e-25 210 507 441 695
Putative endo-beta-N-acetylglucosaminidase OS=Streptococcus pneumoniae (strain ATCC BAA-255 / R6) OX=171101 GN=lytB PE=1 SV=1

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.000245 0.999105 0.000167 0.000165 0.000147 0.000139

TMHMM  Annotations      download full data without filtering help

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