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CAZyme Information: MGYG000000852_00060

You are here: Home > Sequence: MGYG000000852_00060

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Prevotella sp900545525
Lineage Bacteria; Bacteroidota; Bacteroidia; Bacteroidales; Bacteroidaceae; Prevotella; Prevotella sp900545525
CAZyme ID MGYG000000852_00060
CAZy Family PL17
CAZyme Description Exo-oligoalginate lyase
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
740 MGYG000000852_1|CGC3 83031.95 7.2634
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000000852 2918004 MAG China Asia
Gene Location Start: 89790;  End: 92012  Strand: +

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000000852_00060.

CAZyme Signature Domains help

Family Start End Evalue family coverage
PL17 410 545 4.1e-44 0.9568345323741008
PL17 209 289 9.4e-26 0.631578947368421

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
pfam05426 Alginate_lyase 1.38e-16 96 328 40 274
Alginate lyase. This family contains several bacterial alginate lyase proteins. Alginate is a family of 1-4-linked copolymers of beta -D-mannuronic acid (M) and alpha -L-guluronic acid (G). It is produced by brown algae and by some bacteria belonging to the genera Azotobacter and Pseudomonas. Alginate lyases catalyze the depolymerization of alginates by beta -elimination, generating a molecule containing 4-deoxy-L-erythro-hex-4-enepyranosyluronate at the nonreducing end. This family adopts an all alpha fold.
pfam07940 Hepar_II_III 2.47e-10 397 569 1 159
Heparinase II/III-like protein. This family features sequences that are similar to a region of the Flavobacterium heparinum proteins heparinase II and heparinase III. The former is known to degrade heparin and heparin sulphate, whereas the latter predominantly degrades heparin sulphate. Both are secreted into the periplasmic space upon induction with heparin.
PRK00325 algL 0.008 185 302 165 273
polysaccharide lyase.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
QUT26278.1 0.0 42 732 20 711
EGN08295.1 0.0 42 732 20 711
QIU93441.1 0.0 42 721 20 701
QNL39960.1 0.0 42 732 20 711
QNT66845.1 6.81e-313 29 740 10 718

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
7BJT_A 3.64e-183 34 712 17 704
ChainA, Alginate lyase, family PL17 [Zobellia galactanivorans],7BJT_B Chain B, Alginate lyase, family PL17 [Zobellia galactanivorans]
7BM6_A 8.16e-182 34 712 17 704
ChainA, Alginate lyase, family PL17 [Zobellia galactanivorans],7BM6_B Chain B, Alginate lyase, family PL17 [Zobellia galactanivorans]
4NEI_A 8.13e-178 34 712 15 691
Alg17cPL17 Family Alginate Lyase [Saccharophagus degradans 2-40],4NEI_B Alg17c PL17 Family Alginate Lyase [Saccharophagus degradans 2-40]
4OJZ_A 1.82e-176 34 712 15 691
CrystalStructure of Alg17c Mutant Y258A Complexed with Alginate Trisaccharide [Saccharophagus degradans 2-40],4OJZ_B Crystal Structure of Alg17c Mutant Y258A Complexed with Alginate Trisaccharide [Saccharophagus degradans 2-40],4OK2_A Crystal Structure of Alg17c Mutant Y258A [Saccharophagus degradans 2-40],4OK2_B Crystal Structure of Alg17c Mutant Y258A [Saccharophagus degradans 2-40]
4OK4_A 3.63e-176 34 712 15 691
CrystalStructure of Alg17c Mutant H202L [Saccharophagus degradans 2-40],4OK4_B Crystal Structure of Alg17c Mutant H202L [Saccharophagus degradans 2-40]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
Q21FJ0 4.45e-177 34 712 15 691
Exo-oligoalginate lyase OS=Saccharophagus degradans (strain 2-40 / ATCC 43961 / DSM 17024) OX=203122 GN=alg17C PE=1 SV=1
B2FSW8 1.31e-165 25 684 8 665
Alginate lyase OS=Stenotrophomonas maltophilia (strain K279a) OX=522373 GN=Smlt2602 PE=1 SV=1

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.005560 0.993239 0.000595 0.000235 0.000186 0.000178

TMHMM  Annotations      download full data without filtering help

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