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CAZyme Information: MGYG000000852_00812

You are here: Home > Sequence: MGYG000000852_00812

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Prevotella sp900545525
Lineage Bacteria; Bacteroidota; Bacteroidia; Bacteroidales; Bacteroidaceae; Prevotella; Prevotella sp900545525
CAZyme ID MGYG000000852_00812
CAZy Family PL1
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
957 MGYG000000852_7|CGC2 101560.68 5.6507
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000000852 2918004 MAG China Asia
Gene Location Start: 46412;  End: 49285  Strand: +

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000000852_00812.

CAZyme Signature Domains help

Family Start End Evalue family coverage
PL1 478 639 3.9e-34 0.801980198019802
CBM77 854 952 1.6e-23 0.941747572815534

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
COG3866 PelB 5.36e-35 479 772 102 345
Pectate lyase [Carbohydrate transport and metabolism].
pfam18283 CBM77 8.26e-29 854 954 7 108
Carbohydrate binding module 77. This domain is the non-catalytic carbohydrate binding module 77 (CBM77) present in Ruminococcus flavefaciens. CBMs fulfil a critical targeting function in plant cell wall depolymerisation. In CBM77, a cluster of conserved basic residues (Lys1092, Lys1107 and Lys1162) confer calcium-independent recognition of homogalacturonan.
smart00656 Amb_all 2.87e-22 479 638 17 186
Amb_all domain.
pfam00544 Pec_lyase_C 2.39e-08 474 638 30 211
Pectate lyase. This enzyme forms a right handed beta helix structure. Pectate lyase is an enzyme involved in the maceration and soft rotting of plant tissue.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
QNT67442.1 5.27e-188 202 954 29 771
QCD40816.1 3.45e-186 223 810 10 588
QCP73706.1 3.45e-186 223 810 10 588
QUT73893.1 1.35e-180 284 954 25 679
QOR20273.1 6.40e-176 267 802 35 551

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
5FU5_A 9.39e-12 863 952 22 109
Thecomplexity of the Ruminococcus flavefaciens cellulosome reflects an expansion in glycan recognition [Ruminococcus flavefaciens]
1PCL_A 1.31e-09 479 638 81 276
ChainA, PECTATE LYASE E [Dickeya chrysanthemi]
1VBL_A 5.30e-09 479 638 133 330
Structureof the thermostable pectate lyase PL 47 [Bacillus sp. TS-47]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
Q5AVN4 6.79e-15 479 651 99 277
Pectate lyase A OS=Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) OX=227321 GN=plyA PE=1 SV=1
B0XT32 2.15e-13 485 694 97 300
Probable pectate lyase A OS=Neosartorya fumigata (strain CEA10 / CBS 144.89 / FGSC A1163) OX=451804 GN=plyA PE=3 SV=1
Q4WIT0 2.15e-13 485 694 97 300
Probable pectate lyase A OS=Neosartorya fumigata (strain ATCC MYA-4609 / Af293 / CBS 101355 / FGSC A1100) OX=330879 GN=plyA PE=3 SV=1
A1CYB8 1.67e-12 485 694 97 300
Probable pectate lyase A OS=Neosartorya fischeri (strain ATCC 1020 / DSM 3700 / CBS 544.65 / FGSC A1164 / JCM 1740 / NRRL 181 / WB 181) OX=331117 GN=plyA PE=3 SV=1
A2QV36 2.36e-11 479 668 95 295
Probable pectate lyase A OS=Aspergillus niger (strain CBS 513.88 / FGSC A1513) OX=425011 GN=plyA PE=3 SV=1

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.000391 0.998709 0.000224 0.000239 0.000212 0.000195

TMHMM  Annotations      download full data without filtering help

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