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CAZyme Information: MGYG000000852_02427

You are here: Home > Sequence: MGYG000000852_02427

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Prevotella sp900545525
Lineage Bacteria; Bacteroidota; Bacteroidia; Bacteroidales; Bacteroidaceae; Prevotella; Prevotella sp900545525
CAZyme ID MGYG000000852_02427
CAZy Family GH28
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
458 MGYG000000852_54|CGC1 50969.09 8.1263
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000000852 2918004 MAG China Asia
Gene Location Start: 255;  End: 1631  Strand: -

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000000852_02427.

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH28 71 423 4.9e-80 0.9230769230769231

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
COG5434 Pgu1 7.48e-70 15 357 43 398
Polygalacturonase [Carbohydrate transport and metabolism].
pfam00295 Glyco_hydro_28 6.17e-17 143 418 53 303
Glycosyl hydrolases family 28. Glycosyl hydrolase family 28 includes polygalacturonase EC:3.2.1.15 as well as rhamnogalacturonase A(RGase A), EC:3.2.1.-. These enzymes are important in cell wall metabolism.
PLN02793 PLN02793 1.31e-16 51 418 59 394
Probable polygalacturonase
PLN03003 PLN03003 5.22e-16 45 421 24 360
Probable polygalacturonase At3g15720
PLN02188 PLN02188 1.40e-14 45 438 37 387
polygalacturonase/glycoside hydrolase family protein

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
CAJ19131.1 1.26e-229 13 458 2 448
ADY35504.1 3.44e-228 1 457 1 460
AND21958.1 4.93e-228 27 457 11 441
AII62903.1 1.10e-227 27 457 33 463
QUT83816.1 1.10e-227 27 457 33 463

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
3JUR_A 3.92e-84 28 444 11 445
Thecrystal structure of a hyperthermoactive Exopolygalacturonase from Thermotoga maritima [Thermotoga maritima],3JUR_B The crystal structure of a hyperthermoactive Exopolygalacturonase from Thermotoga maritima [Thermotoga maritima],3JUR_C The crystal structure of a hyperthermoactive Exopolygalacturonase from Thermotoga maritima [Thermotoga maritima],3JUR_D The crystal structure of a hyperthermoactive Exopolygalacturonase from Thermotoga maritima [Thermotoga maritima]
5OLP_A 3.86e-78 41 434 41 442
Galacturonidase[Bacteroides thetaiotaomicron VPI-5482],5OLP_B Galacturonidase [Bacteroides thetaiotaomicron VPI-5482]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
A7PZL3 2.74e-40 7 456 22 465
Probable polygalacturonase OS=Vitis vinifera OX=29760 GN=GSVIVT00026920001 PE=1 SV=1
P15922 1.34e-18 20 378 130 504
Exo-poly-alpha-D-galacturonosidase OS=Dickeya chrysanthemi OX=556 GN=pehX PE=1 SV=1
P27644 1.06e-17 201 400 25 243
Polygalacturonase OS=Rhizobium radiobacter OX=358 GN=pgl PE=2 SV=1
P43212 1.08e-17 46 432 60 417
Polygalacturonase OS=Cryptomeria japonica OX=3369 PE=1 SV=1
Q9LW07 2.80e-16 45 421 24 360
Probable polygalacturonase At3g15720 OS=Arabidopsis thaliana OX=3702 GN=At3g15720 PE=3 SV=1

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.000186 0.999242 0.000156 0.000144 0.000138 0.000127

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000000852_02427.