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CAZyme Information: MGYG000000853_01169

You are here: Home > Sequence: MGYG000000853_01169

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Prevotella sp900549175
Lineage Bacteria; Bacteroidota; Bacteroidia; Bacteroidales; Bacteroidaceae; Prevotella; Prevotella sp900549175
CAZyme ID MGYG000000853_01169
CAZy Family PL1
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
1342 141828.07 4.4683
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000000853 3157276 MAG China Asia
Gene Location Start: 11772;  End: 15800  Strand: +

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000000853_01169.

CAZyme Signature Domains help

Family Start End Evalue family coverage
PL1 76 254 2.5e-48 0.9890710382513661

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
cd00063 FN3 2.88e-07 433 520 3 93
Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all animal proteins contain the FN3 repeat; including extracellular and intracellular proteins, membrane spanning cytokine receptors, growth hormone receptors, tyrosine phosphatase receptors, and adhesion molecules. FN3-like domains are also found in bacterial glycosyl hydrolases.
PRK15319 PRK15319 5.96e-07 557 1033 595 1121
fibronectin-binding autotransporter adhesin ShdA.
pfam18884 TSP3_bac 6.50e-05 381 401 1 21
Bacterial TSP3 repeat. This entry contains a novel bacterial thrombospondin type 3 repeat which differs from the typical consensus by containing a glutamate in place of one of the calcium binding aspartate residues.
PRK15319 PRK15319 1.19e-04 895 1045 1430 1582
fibronectin-binding autotransporter adhesin ShdA.
smart00060 FN3 6.24e-04 433 508 3 83
Fibronectin type 3 domain. One of three types of internal repeat within the plasma protein, fibronectin. The tenth fibronectin type III repeat contains a RGD cell recognition sequence in a flexible loop between 2 strands. Type III modules are present in both extracellular and intracellular proteins.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
AEV97716.1 4.75e-278 22 963 28 988
QUT73817.1 1.13e-132 23 528 21 564
QCD38445.1 2.71e-130 12 524 14 565
QKD53272.1 3.15e-130 12 422 6 412
CCT64558.1 6.13e-130 12 422 6 412

PDB Hits      help

has no PDB hit.

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
A1DPF0 2.58e-117 18 422 10 414
Probable pectate lyase C OS=Neosartorya fischeri (strain ATCC 1020 / DSM 3700 / CBS 544.65 / FGSC A1164 / JCM 1740 / NRRL 181 / WB 181) OX=331117 GN=plyC PE=3 SV=1
B0XMA2 1.33e-115 18 422 10 414
Probable pectate lyase C OS=Neosartorya fumigata (strain CEA10 / CBS 144.89 / FGSC A1163) OX=451804 GN=plyC PE=3 SV=1
Q4WL88 1.85e-115 18 422 10 414
Probable pectate lyase C OS=Neosartorya fumigata (strain ATCC MYA-4609 / Af293 / CBS 101355 / FGSC A1100) OX=330879 GN=plyC PE=3 SV=1
Q0CLG7 2.45e-113 19 422 13 413
Probable pectate lyase C OS=Aspergillus terreus (strain NIH 2624 / FGSC A1156) OX=341663 GN=plyC PE=3 SV=1
B8NQQ7 1.23e-110 26 422 21 413
Probable pectate lyase C OS=Aspergillus flavus (strain ATCC 200026 / FGSC A1120 / IAM 13836 / NRRL 3357 / JCM 12722 / SRRC 167) OX=332952 GN=plyC PE=3 SV=1

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.000254 0.999101 0.000190 0.000160 0.000142 0.000133

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000000853_01169.