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CAZyme Information: MGYG000000872_01324

You are here: Home > Sequence: MGYG000000872_01324

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species UBA7173 sp900540205
Lineage Bacteria; Bacteroidota; Bacteroidia; Bacteroidales; Muribaculaceae; UBA7173; UBA7173 sp900540205
CAZyme ID MGYG000000872_01324
CAZy Family CBM13
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
955 104722.03 4.7313
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000000872 2772884 MAG United States North America
Gene Location Start: 48622;  End: 51489  Strand: -

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000000872_01324.

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
pfam13385 Laminin_G_3 2.20e-18 726 893 3 151
Concanavalin A-like lectin/glucanases superfamily. This domain belongs to the Concanavalin A-like lectin/glucanases superfamily.
smart00060 FN3 4.24e-06 591 666 1 81
Fibronectin type 3 domain. One of three types of internal repeat within the plasma protein, fibronectin. The tenth fibronectin type III repeat contains a RGD cell recognition sequence in a flexible loop between 2 strands. Type III modules are present in both extracellular and intracellular proteins.
cd00063 FN3 2.88e-05 591 678 1 92
Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all animal proteins contain the FN3 repeat; including extracellular and intracellular proteins, membrane spanning cytokine receptors, growth hormone receptors, tyrosine phosphatase receptors, and adhesion molecules. FN3-like domains are also found in bacterial glycosyl hydrolases.
COG3979 COG3979 7.22e-04 590 691 5 102
Chitodextrinase [Carbohydrate transport and metabolism].
COG3401 FN3 0.002 590 677 256 341
Fibronectin type 3 domain [General function prediction only].

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
ALJ60208.1 6.44e-167 13 903 22 852
QUT88791.1 9.83e-166 13 903 22 852
ASB47762.1 3.73e-154 41 888 46 830
APZ45922.1 1.77e-149 28 892 25 835
AUC19784.1 1.77e-149 28 892 25 835

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
4QVS_A 6.28e-07 702 893 27 217
ChainA, S-layer domain-containing protein [Acetivibrio thermocellus ATCC 27405]

Swiss-Prot Hits      help

has no Swissprot hit.

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.000446 0.998569 0.000318 0.000243 0.000203 0.000185

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000000872_01324.