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CAZyme Information: MGYG000000909_01435

You are here: Home > Sequence: MGYG000000909_01435

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species UBA9502 sp900538475
Lineage Bacteria; Firmicutes_A; Clostridia; Lachnospirales; Lachnospiraceae; UBA9502; UBA9502 sp900538475
CAZyme ID MGYG000000909_01435
CAZy Family GH28
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
521 MGYG000000909_11|CGC1 58593.73 5.0518
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000000909 3035568 MAG China Asia
Gene Location Start: 23417;  End: 24982  Strand: -

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000000909_01435.

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH28 107 466 1e-71 0.92

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
COG5434 Pgu1 9.46e-99 9 518 9 532
Polygalacturonase [Carbohydrate transport and metabolism].
PLN02218 PLN02218 4.78e-29 58 460 50 408
polygalacturonase ADPG
PLN02793 PLN02793 2.22e-27 67 399 42 342
Probable polygalacturonase
pfam00295 Glyco_hydro_28 5.29e-26 171 392 41 246
Glycosyl hydrolases family 28. Glycosyl hydrolase family 28 includes polygalacturonase EC:3.2.1.15 as well as rhamnogalacturonase A(RGase A), EC:3.2.1.-. These enzymes are important in cell wall metabolism.
PLN02188 PLN02188 3.20e-23 73 467 29 383
polygalacturonase/glycoside hydrolase family protein

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
QRP36832.1 3.87e-263 1 520 1 522
ASN98356.1 3.87e-263 1 520 1 522
QJU22750.1 1.49e-260 1 520 1 522
QIX91771.1 2.69e-256 1 520 1 522
ABX43097.1 1.90e-255 1 516 1 515

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
3JUR_A 1.72e-38 81 409 28 375
Thecrystal structure of a hyperthermoactive Exopolygalacturonase from Thermotoga maritima [Thermotoga maritima],3JUR_B The crystal structure of a hyperthermoactive Exopolygalacturonase from Thermotoga maritima [Thermotoga maritima],3JUR_C The crystal structure of a hyperthermoactive Exopolygalacturonase from Thermotoga maritima [Thermotoga maritima],3JUR_D The crystal structure of a hyperthermoactive Exopolygalacturonase from Thermotoga maritima [Thermotoga maritima]
5OLP_A 1.26e-29 70 381 37 355
Galacturonidase[Bacteroides thetaiotaomicron VPI-5482],5OLP_B Galacturonidase [Bacteroides thetaiotaomicron VPI-5482]
2UVE_A 2.29e-24 47 412 116 516
Structureof Yersinia enterocolitica Family 28 Exopolygalacturonase [Yersinia enterocolitica],2UVE_B Structure of Yersinia enterocolitica Family 28 Exopolygalacturonase [Yersinia enterocolitica],2UVF_A Structure of Yersinia enterocolitica Family 28 Exopolygalacturonase in Complex with Digalaturonic Acid [Yersinia enterocolitica],2UVF_B Structure of Yersinia enterocolitica Family 28 Exopolygalacturonase in Complex with Digalaturonic Acid [Yersinia enterocolitica]
1BHE_A 2.41e-24 97 461 26 362
ChainA, POLYGALACTURONASE [Pectobacterium carotovorum]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
P27644 2.21e-55 224 475 23 276
Polygalacturonase OS=Rhizobium radiobacter OX=358 GN=pgl PE=2 SV=1
A7PZL3 5.51e-44 85 466 67 430
Probable polygalacturonase OS=Vitis vinifera OX=29760 GN=GSVIVT00026920001 PE=1 SV=1
Q8RY29 2.16e-27 58 460 50 408
Polygalacturonase ADPG2 OS=Arabidopsis thaliana OX=3702 GN=ADPG2 PE=2 SV=2
P48978 6.08e-26 80 460 98 438
Polygalacturonase OS=Malus domestica OX=3750 PE=2 SV=1
P15922 3.74e-25 48 412 112 509
Exo-poly-alpha-D-galacturonosidase OS=Dickeya chrysanthemi OX=556 GN=pehX PE=1 SV=1

SignalP and Lipop Annotations help

This protein is predicted as OTHER

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.987990 0.011717 0.000223 0.000033 0.000015 0.000041

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000000909_01435.