CAZyme Information: MGYG000000909_01440

Basic Information

• Species: UBA9502 sp900538475
• Lineage: Bacteria; Firmicutes_A; Clostridia; Lachnospirales; Lachnospiraceae; UBA9502; UBA9502 sp900538475
• CAZyme ID: MGYG000000909_01440
• CAZy Family: GH105
• CAZyme Description: Unsaturated rhamnogalacturonyl hydrolase YteR

CAZyme Property

Protein Length	CGC	Molecular Weight	Isoelectric Point
377	MGYG000000909_11|CGC1	44180.29	4.7453

Genome Property

Genome Assembly ID	Genome Size	Genome Type	Country	Continent
MGYG000000909	3035568	MAG	China	Asia

• Gene Location: Start: 28996; End: 30129 Strand: +

Full Sequence      

MKILDRYIEQLLEKSSPQMPVWNIEKIKEGKESTWNYMDGCMIKAILELYHITKKEEYLT
FADNFIDYFVSEDGSIKSYDPNEHNLDHVNAGKTLFDLYKLTGKEKYRKAIDTVYSQLKT
QPRTSTGNFWHKAIYPNQIWLDGLYMAQPFYMQYELTYNEGKNCLDSFQQFLNVYSLMRD
LRNGLYYHAYDDSRESFWCDKVTGLSDNFWLRALGWYAMALIDTMEVMPEETLGAEKKEL
NRIYKELIDSMLPYQDEKTGMWYQVVNRGGIRPNYLETSGSAIFAYAIMKSVRLGFLEEN
YFQYGRKAFDGICSTYLSEENGELQLDGICLVAGLGNKEMREGTFDYYMREPIVKNEAKG
VAPLILAYIEILFRGEE

Enzyme Prediction     

No EC number prediction in MGYG000000909_01440.

CAZyme Signature Domains

Family	Start	End	Evalue	family coverage
GH105	28	371	2.4e-110	0.9759036144578314

CDD Domains     

Cdd ID	Domain	E-Value	qStart	qEnd	sStart	sEnd	Domain Description
COG4225	YesR	2.22e-90	35	370	34	352	Rhamnogalacturonyl hydrolase YesR [Carbohydrate transport and metabolism].
pfam07470	Glyco_hydro_88	3.00e-85	35	372	27	340	Glycosyl Hydrolase Family 88. Unsaturated glucuronyl hydrolase catalyzes the hydrolytic release of unsaturated glucuronic acids from oligosaccharides (EC:3.2.1.-) produced by the reactions of polysaccharide lyases.
COG1331	YyaL	0.003	42	127	473	580	Uncharacterized conserved protein YyaL, SSP411 family, contains thoiredoxin and six-hairpin glycosidase-like domains [General function prediction only].

CAZyme Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End
QRP36827.1	1.32e-225	1	374	1	373
ASN98361.1	1.32e-225	1	374	1	373
QIX91776.1	3.09e-224	1	374	1	373
ANU47524.1	6.24e-224	1	374	1	373
QQR03578.1	6.24e-224	1	374	1	373

PDB Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
4WU0_A	5.95e-101	35	370	23	357	StructuralAnalysis of C. acetobutylicum ATCC 824 Glycoside Hydrolase From Family 105 [Clostridium acetobutylicum ATCC 824],4WU0_B Structural Analysis of C. acetobutylicum ATCC 824 Glycoside Hydrolase From Family 105 [Clostridium acetobutylicum ATCC 824]
1NC5_A	3.27e-64	19	374	25	369	Structureof Protein of Unknown Function of YteR from Bacillus Subtilis [Bacillus subtilis],2D8L_A Crystal Structure of Unsaturated Rhamnogalacturonyl Hydrolase in complex with dGlcA-GalNAc [Bacillus subtilis]
2GH4_A	1.38e-63	19	374	15	359	ChainA, Putative glycosyl hydrolase yteR [Bacillus subtilis]
3QWT_A	5.79e-10	122	325	146	340	ChainA, Putative GH105 family protein [Salmonella enterica subsp. enterica serovar Paratyphi A],3QWT_B Chain B, Putative GH105 family protein [Salmonella enterica subsp. enterica serovar Paratyphi A],3QWT_C Chain C, Putative GH105 family protein [Salmonella enterica subsp. enterica serovar Paratyphi A],3QWT_D Chain D, Putative GH105 family protein [Salmonella enterica subsp. enterica serovar Paratyphi A]
3PMM_A	5.74e-08	35	372	66	378	ChainA, Putative cytoplasmic protein [Klebsiella pneumoniae subsp. pneumoniae MGH 78578]

Swiss-Prot Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
O34559	1.79e-63	19	374	25	369	Unsaturated rhamnogalacturonyl hydrolase YteR OS=Bacillus subtilis (strain 168) OX=224308 GN=yteR PE=1 SV=1
P0A3U6	1.37e-45	146	372	1	229	Protein Atu3128 OS=Agrobacterium fabrum (strain C58 / ATCC 33970) OX=176299 GN=Atu3128 PE=3 SV=1
P0A3U7	1.37e-45	146	372	1	229	24.9 kDa protein in picA locus OS=Rhizobium radiobacter OX=358 PE=2 SV=1

SignalP and Lipop Annotations

This protein is predicted as OTHER

Other	SP_Sec_SPI	LIPO_Sec_SPII	TAT_Tat_SPI	TATLIP_Sec_SPII	PILIN_Sec_SPIII
1.000041	0.000000	0.000000	0.000000	0.000000	0.000000

TMHMM  Annotations     

There is no transmembrane helices in MGYG000000909_01440.