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CAZyme Information: MGYG000000915_02420

You are here: Home > Sequence: MGYG000000915_02420

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Clostridium nigeriense
Lineage Bacteria; Firmicutes_A; Clostridia; Clostridiales; Clostridiaceae; Clostridium; Clostridium nigeriense
CAZyme ID MGYG000000915_02420
CAZy Family GH0
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
464 MGYG000000915_9|CGC1 52199.03 4.9692
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000000915 3503945 MAG China Asia
Gene Location Start: 61585;  End: 62979  Strand: +

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000000915_02420.

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
pfam01471 PG_binding_1 1.19e-13 355 416 1 57
Putative peptidoglycan binding domain. This domain is composed of three alpha helices. This domain is found at the N or C-terminus of a variety of enzymes involved in bacterial cell wall degradation. This domain may have a general peptidoglycan binding function. This family is found N-terminal to the catalytic domain of matrixins. The domain is found to bind peptidoglycan experimentally.
COG3409 PGRP 1.47e-07 353 416 42 102
Peptidoglycan-binding (PGRP) domain of peptidoglycan hydrolases [Cell wall/membrane/envelope biogenesis].
COG3409 PGRP 3.64e-05 345 416 116 183
Peptidoglycan-binding (PGRP) domain of peptidoglycan hydrolases [Cell wall/membrane/envelope biogenesis].

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
QBJ74211.1 1.59e-263 3 459 4 442
AYE34395.1 2.15e-261 3 459 4 442
QAS59800.1 2.15e-261 3 459 4 442
ASW42008.1 1.27e-253 2 463 3 454
QSW20651.1 1.26e-233 3 459 4 437

PDB Hits      help

has no PDB hit.

Swiss-Prot Hits      help

has no Swissprot hit.

SignalP and Lipop Annotations help

This protein is predicted as OTHER

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
1.000064 0.000000 0.000000 0.000000 0.000000 0.000000

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000000915_02420.