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CAZyme Information: MGYG000000920_02172
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Basic Information |
Genomic context |
Full Sequence |
Enzyme annotations |
CAZy signature domains |
CDD domains |
CAZyme hits |
PDB hits |
Swiss-Prot hits |
SignalP and Lipop annotations |
TMHMM annotations
Basic Information help
| Species | Gemmiger sp900548355 | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Lineage | Bacteria; Firmicutes_A; Clostridia; Oscillospirales; Ruminococcaceae; Gemmiger; Gemmiger sp900548355 | |||||||||||
| CAZyme ID | MGYG000000920_02172 | |||||||||||
| CAZy Family | GH2 | |||||||||||
| CAZyme Description | Beta-galactosidase BoGH2A | |||||||||||
| CAZyme Property |
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| Genome Property |
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| Gene Location | Start: 3639; End: 5720 Strand: + | |||||||||||
CAZyme Signature Domains help
| Family | Start | End | Evalue | family coverage |
|---|---|---|---|---|
| GH2 | 2 | 417 | 3e-64 | 0.40824468085106386 |
CDD Domains download full data without filtering help
| Cdd ID | Domain | E-Value | qStart | qEnd | sStart | sEnd | Domain Description |
|---|---|---|---|---|---|---|---|
| COG3250 | LacZ | 5.73e-38 | 52 | 313 | 217 | 441 | Beta-galactosidase/beta-glucuronidase [Carbohydrate transport and metabolism]. |
| pfam18565 | Glyco_hydro2_C5 | 8.76e-31 | 582 | 683 | 1 | 103 | Glycoside hydrolase family 2 C-terminal domain 5. Domain 5 is found in dimeric beta-D-galactosidase from Paracoccus sp. 32d, which contributes to stabilization of the functional dimer. It is suggested that the location of this domain 5, may be one of the factors responsible for the creation of a functional dimer and cold-adaptation of this enzyme. |
| pfam02836 | Glyco_hydro_2_C | 1.19e-24 | 149 | 303 | 10 | 170 | Glycosyl hydrolases family 2, TIM barrel domain. This family contains beta-galactosidase, beta-mannosidase and beta-glucuronidase activities. |
| PRK09525 | lacZ | 4.98e-21 | 3 | 294 | 215 | 485 | beta-galactosidase. |
| PRK10340 | ebgA | 2.11e-20 | 24 | 294 | 223 | 472 | cryptic beta-D-galactosidase subunit alpha; Reviewed |
CAZyme Hits help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End |
|---|---|---|---|---|---|
| AHF23795.1 | 1.46e-270 | 1 | 686 | 149 | 833 |
| AHF25955.1 | 1.18e-269 | 1 | 686 | 149 | 833 |
| AHF24670.1 | 6.50e-269 | 1 | 686 | 146 | 829 |
| AHF25051.1 | 7.96e-262 | 1 | 684 | 150 | 818 |
| QTE73053.1 | 1.74e-255 | 1 | 686 | 148 | 818 |
PDB Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| 6B6L_A | 1.77e-105 | 60 | 684 | 212 | 775 | Thecrystal structure of glycosyl hydrolase family 2 (GH2) member from Bacteroides cellulosilyticus DSM 14838 [Bacteroides cellulosilyticus DSM 14838],6B6L_B The crystal structure of glycosyl hydrolase family 2 (GH2) member from Bacteroides cellulosilyticus DSM 14838 [Bacteroides cellulosilyticus DSM 14838] |
| 7RSK_A | 1.90e-105 | 60 | 684 | 212 | 775 | ChainA, Glycosyl hydrolase family 2, sugar binding domain protein [Bacteroides cellulosilyticus DSM 14838],7RSK_B Chain B, Glycosyl hydrolase family 2, sugar binding domain protein [Bacteroides cellulosilyticus DSM 14838] |
| 7CWD_A | 2.85e-66 | 9 | 684 | 161 | 799 | ChainA, beta-glalactosidase [Niallia circulans],7CWI_A Chain A, beta-galactosidase [Niallia circulans] |
| 5T98_A | 2.04e-61 | 8 | 684 | 179 | 818 | Crystalstructure of BuGH2Awt [Bacteroides uniformis],5T98_B Crystal structure of BuGH2Awt [Bacteroides uniformis],5T99_A Crystal structure of BuGH2Awt in complex with Galactoisofagomine [Bacteroides uniformis],5T99_B Crystal structure of BuGH2Awt in complex with Galactoisofagomine [Bacteroides uniformis] |
| 4YPJ_A | 3.32e-61 | 9 | 677 | 167 | 798 | ChainA, Beta galactosidase [Niallia circulans],4YPJ_B Chain B, Beta galactosidase [Niallia circulans] |
Swiss-Prot Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| A7LXS9 | 1.32e-54 | 9 | 682 | 199 | 844 | Beta-galactosidase BoGH2A OS=Bacteroides ovatus (strain ATCC 8483 / DSM 1896 / JCM 5824 / BCRC 10623 / CCUG 4943 / NCTC 11153) OX=411476 GN=BACOVA_02645 PE=1 SV=1 |
| T2KM09 | 3.89e-43 | 1 | 613 | 194 | 746 | Putative beta-glucuronidase OS=Formosa agariphila (strain DSM 15362 / KCTC 12365 / LMG 23005 / KMM 3901 / M-2Alg 35-1) OX=1347342 GN=BN863_22050 PE=2 SV=2 |
| A9MQ82 | 1.74e-24 | 33 | 319 | 239 | 505 | Beta-galactosidase OS=Salmonella arizonae (strain ATCC BAA-731 / CDC346-86 / RSK2980) OX=41514 GN=lacZ PE=3 SV=2 |
| B1LIM9 | 1.05e-21 | 31 | 319 | 237 | 505 | Beta-galactosidase OS=Escherichia coli (strain SMS-3-5 / SECEC) OX=439855 GN=lacZ PE=3 SV=1 |
| B7N8Q1 | 1.38e-21 | 31 | 319 | 237 | 505 | Beta-galactosidase OS=Escherichia coli O17:K52:H18 (strain UMN026 / ExPEC) OX=585056 GN=lacZ PE=3 SV=1 |
SignalP and Lipop Annotations help
This protein is predicted as OTHER
| Other | SP_Sec_SPI | LIPO_Sec_SPII | TAT_Tat_SPI | TATLIP_Sec_SPII | PILIN_Sec_SPIII |
|---|---|---|---|---|---|
| 1.000051 | 0.000002 | 0.000000 | 0.000000 | 0.000000 | 0.000000 |