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CAZyme Information: MGYG000000937_01706

You are here: Home > Sequence: MGYG000000937_01706

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species UMGS403 sp900541975
Lineage Bacteria; Firmicutes_A; Clostridia; Oscillospirales; Acutalibacteraceae; UMGS403; UMGS403 sp900541975
CAZyme ID MGYG000000937_01706
CAZy Family GH23
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
2719 MGYG000000937_17|CGC1 307957.17 4.6315
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000000937 2265948 MAG Germany Europe
Gene Location Start: 20486;  End: 28645  Strand: +

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000000937_01706.

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
COG4646 COG4646 1.99e-73 1407 1938 1 540
Adenine-specific DNA methylase, N12 class [Replication, recombination and repair].
COG4646 COG4646 3.77e-25 2068 2270 427 637
Adenine-specific DNA methylase, N12 class [Replication, recombination and repair].
smart00487 DEXDc 1.18e-11 1882 1985 7 110
DEAD-like helicases superfamily.
cd18011 DEXDc_RapA 7.01e-11 1884 2142 1 183
DEXH-box helicase domain of RapA. In bacteria, RapA is an RNA polymerase (RNAP)-associated SWI2/SNF2 (switch/sucrose non-fermentable) protein that mediates RNAP recycling during transcription. The ATPase activity of RapA is stimulated by its interaction with RNAP and inhibited by its N-terminal domain. The conformational changes of RapA and its interaction with RNAP are essential for RNAP recycling. RapA is part of the DEAD-like helicase superfamily, a diverse family of proteins involved in ATP-dependent RNA or DNA unwinding. This domain contains the ATP-binding region.
cd17919 DEXHc_Snf 4.73e-09 1884 2139 1 175
DEXH/Q-box helicase domain of DEAD-like helicase Snf family proteins. Sucrose Non-Fermenting (SNF) proteins DEAD-like helicases superfamily. A diverse family of proteins involved in ATP-dependent RNA or DNA unwinding. This domain contains the ATP-binding region.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
ASV45029.1 0.0 1106 2643 1542 3166
QIW86704.1 0.0 1106 2643 1610 3234
QIW86628.1 0.0 1106 2643 1610 3234
AEY69616.1 0.0 1106 2671 1683 3330
AXF51455.1 0.0 1106 2671 1776 3423

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
1Z6A_A 2.39e-06 2117 2444 181 476
Sulfolobussolfataricus SWI2/SNF2 ATPase core domain [Saccharolobus solfataricus P2]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
Q71TF8 4.00e-45 1120 2455 40 1567
Defense against restriction protein B OS=Escherichia phage P1 OX=2886926 GN=darB PE=3 SV=1

SignalP and Lipop Annotations help

This protein is predicted as OTHER

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
1.000068 0.000000 0.000000 0.000000 0.000000 0.000000

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000000937_01706.