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CAZyme Information: MGYG000000940_00254

You are here: Home > Sequence: MGYG000000940_00254

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Collinsella sp900548935
Lineage Bacteria; Actinobacteriota; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; Collinsella sp900548935
CAZyme ID MGYG000000940_00254
CAZy Family CE8
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
721 MGYG000000940_9|CGC1 79182.19 5.3408
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000000940 1957495 MAG Germany Europe
Gene Location Start: 13100;  End: 15265  Strand: +

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000000940_00254.

CAZyme Signature Domains help

Family Start End Evalue family coverage
CE8 10 329 8.8e-78 0.9826388888888888
CE19 462 698 9.1e-27 0.5813253012048193

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
COG4677 PemB 2.42e-61 6 314 81 388
Pectin methylesterase and related acyl-CoA thioesterases [Carbohydrate transport and metabolism, Lipid transport and metabolism].
pfam01095 Pectinesterase 7.91e-50 16 311 10 275
Pectinesterase.
PLN02432 PLN02432 2.56e-41 1 334 7 291
putative pectinesterase
PLN02708 PLN02708 3.94e-41 10 336 245 550
Probable pectinesterase/pectinesterase inhibitor
PLN02773 PLN02773 4.55e-40 8 314 7 282
pectinesterase

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
QIA34433.1 0.0 1 719 1 719
ATP54718.1 0.0 1 721 1 721
QUC03567.1 0.0 8 712 7 706
QRP39805.1 3.59e-96 8 336 18 349
ASN95501.1 3.59e-96 8 336 18 349

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
1XG2_A 2.65e-27 10 310 7 277
ChainA, Pectinesterase 1 [Solanum lycopersicum]
3UW0_A 1.81e-24 33 283 55 305
Pectinmethylesterase from Yersinia enterocolitica [Yersinia enterocolitica subsp. enterocolitica 8081]
5C1E_A 1.22e-23 16 278 17 245
CrystalStructure of the Pectin Methylesterase from Aspergillus niger in Penultimately Deglycosylated Form (N-acetylglucosamine Stub at Asn84) [Aspergillus niger ATCC 1015]
5C1C_A 2.22e-23 16 278 17 245
CrystalStructure of the Pectin Methylesterase from Aspergillus niger in Deglycosylated Form [Aspergillus niger ATCC 1015]
1GQ8_A 1.06e-22 16 330 17 304
Pectinmethylesterase from Carrot [Daucus carota]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
Q8GXA1 2.73e-32 10 337 260 559
Probable pectinesterase/pectinesterase inhibitor 23 OS=Arabidopsis thaliana OX=3702 GN=PME23 PE=2 SV=3
O81320 6.04e-31 10 328 167 453
Putative pectinesterase/pectinesterase inhibitor 38 OS=Arabidopsis thaliana OX=3702 GN=PME38 PE=3 SV=1
Q43062 6.20e-30 10 310 211 482
Pectinesterase/pectinesterase inhibitor PPE8B OS=Prunus persica OX=3760 PE=2 SV=1
Q8L7Q7 1.21e-29 18 324 301 593
Probable pectinesterase/pectinesterase inhibitor 64 OS=Arabidopsis thaliana OX=3702 GN=PME64 PE=2 SV=2
O22256 5.06e-29 16 334 254 546
Probable pectinesterase/pectinesterase inhibitor 20 OS=Arabidopsis thaliana OX=3702 GN=PME20 PE=2 SV=2

SignalP and Lipop Annotations help

This protein is predicted as OTHER

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
1.000056 0.000003 0.000000 0.000000 0.000000 0.000000

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000000940_00254.