Species | Barnesiella sp900538705 | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|
Lineage | Bacteria; Bacteroidota; Bacteroidia; Bacteroidales; Barnesiellaceae; Barnesiella; Barnesiella sp900538705 | |||||||||||
CAZyme ID | MGYG000000956_00048 | |||||||||||
CAZy Family | PL1 | |||||||||||
CAZyme Description | hypothetical protein | |||||||||||
CAZyme Property |
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Genome Property |
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Gene Location | Start: 50221; End: 52032 Strand: + |
Family | Start | End | Evalue | family coverage |
---|---|---|---|---|
PL1 | 219 | 390 | 5e-43 | 0.8316831683168316 |
Cdd ID | Domain | E-Value | qStart | qEnd | sStart | sEnd | Domain Description |
---|---|---|---|---|---|---|---|
COG3866 | PelB | 1.31e-54 | 164 | 504 | 52 | 340 | Pectate lyase [Carbohydrate transport and metabolism]. |
smart00656 | Amb_all | 4.04e-31 | 215 | 392 | 7 | 190 | Amb_all domain. |
pfam00544 | Pec_lyase_C | 1.89e-14 | 188 | 388 | 1 | 211 | Pectate lyase. This enzyme forms a right handed beta helix structure. Pectate lyase is an enzyme involved in the maceration and soft rotting of plant tissue. |
TIGR04183 | Por_Secre_tail | 6.22e-04 | 554 | 603 | 12 | 72 | Por secretion system C-terminal sorting domain. Species that include Porphyromonas gingivalis, Fibrobacter succinogenes, Flavobacterium johnsoniae, Cytophaga hutchinsonii, Gramella forsetii, Prevotella intermedia, and Salinibacter ruber average twenty or more copies of a C-terminal domain, represented by this model, associated with sorting to the outer membrane and covalent modification. |
Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End |
---|---|---|---|---|---|
AQR94278.1 | 1.65e-171 | 14 | 546 | 74 | 596 |
AGF55382.1 | 6.63e-171 | 14 | 546 | 74 | 596 |
AQS15728.1 | 2.61e-168 | 27 | 552 | 61 | 577 |
AGX44552.1 | 2.61e-168 | 27 | 552 | 61 | 577 |
AQS01745.1 | 2.61e-168 | 27 | 552 | 61 | 577 |
Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
---|---|---|---|---|---|---|
3VMV_A | 7.21e-29 | 188 | 390 | 47 | 248 | Crystalstructure of pectate lyase Bsp165PelA from Bacillus sp. N165 [Bacillus sp. N16-5],3VMW_A Crystal structure of pectate lyase Bsp165PelA from Bacillus sp. N165 in complex with trigalacturonate [Bacillus sp. N16-5] |
1AIR_A | 3.35e-17 | 231 | 416 | 94 | 280 | ChainA, PECTATE LYASE C [Dickeya chrysanthemi],1O88_A Chain A, Pectate Lyase C [Dickeya chrysanthemi],1O8D_A Chain A, PECTATE LYASE C [Dickeya chrysanthemi],1O8E_A Chain A, PECTATE LYASE C [Dickeya chrysanthemi],1O8F_A Chain A, PECTATE LYASE C [Dickeya chrysanthemi],1O8G_A Chain A, PECTATE LYASE C [Dickeya chrysanthemi],1O8H_A Chain A, PECTATE LYASE C [Dickeya chrysanthemi],1O8I_A Chain A, PECTATE LYASE C [Dickeya chrysanthemi],1O8J_A Chain A, PECTATE LYASE C [Dickeya chrysanthemi],1O8K_A Chain A, PECTATE LYASE C [Dickeya chrysanthemi],1O8L_A Chain A, PECTATE LYASE C [Dickeya chrysanthemi],1O8M_A Chain A, PECTATE LYASE C [Dickeya chrysanthemi],1PLU_A Chain A, Protein (pectate Lyase C) [Dickeya chrysanthemi],2PEC_A Chain A, PECTATE LYASE C [Dickeya chrysanthemi] |
3ZSC_A | 7.03e-17 | 222 | 365 | 66 | 213 | Catalyticfunction and substrate recognition of the pectate lyase from Thermotoga maritima [Thermotoga maritima] |
2EWE_A | 8.09e-17 | 231 | 416 | 94 | 280 | ChainA, Pectate lyase C [Dickeya chrysanthemi] |
1VBL_A | 1.04e-16 | 196 | 388 | 101 | 330 | Structureof the thermostable pectate lyase PL 47 [Bacillus sp. TS-47] |
Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
---|---|---|---|---|---|---|
Q65DC2 | 1.52e-26 | 168 | 396 | 64 | 280 | Pectate trisaccharide-lyase OS=Bacillus licheniformis (strain ATCC 14580 / DSM 13 / JCM 2505 / CCUG 7422 / NBRC 12200 / NCIMB 9375 / NCTC 10341 / NRRL NRS-1264 / Gibson 46) OX=279010 GN=BLi04129 PE=3 SV=1 |
B1B6T1 | 1.52e-26 | 168 | 396 | 64 | 280 | Pectate trisaccharide-lyase OS=Bacillus sp. OX=1409 GN=pel PE=1 SV=1 |
Q8GCB2 | 1.52e-26 | 168 | 396 | 64 | 280 | Pectate trisaccharide-lyase OS=Bacillus licheniformis OX=1402 GN=pelA PE=1 SV=1 |
P04959 | 2.95e-17 | 104 | 416 | 1 | 302 | Pectate lyase B OS=Dickeya chrysanthemi OX=556 GN=pelB PE=3 SV=1 |
Q5AVN4 | 3.09e-17 | 224 | 401 | 98 | 277 | Pectate lyase A OS=Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) OX=227321 GN=plyA PE=1 SV=1 |
Other | SP_Sec_SPI | LIPO_Sec_SPII | TAT_Tat_SPI | TATLIP_Sec_SPII | PILIN_Sec_SPIII |
---|---|---|---|---|---|
0.000692 | 0.998393 | 0.000240 | 0.000251 | 0.000219 | 0.000197 |
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