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CAZyme Information: MGYG000000956_00685

You are here: Home > Sequence: MGYG000000956_00685

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Barnesiella sp900538705
Lineage Bacteria; Bacteroidota; Bacteroidia; Bacteroidales; Barnesiellaceae; Barnesiella; Barnesiella sp900538705
CAZyme ID MGYG000000956_00685
CAZy Family PL1
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
606 66986.16 4.5682
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000000956 2507716 MAG Denmark Europe
Gene Location Start: 811052;  End: 812872  Strand: -

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000000956_00685.

CAZyme Signature Domains help

Family Start End Evalue family coverage
PL1 105 301 1.3e-67 0.9890710382513661

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
COG3866 PelB 9.27e-09 37 247 21 236
Pectate lyase [Carbohydrate transport and metabolism].
smart00656 Amb_all 4.67e-05 97 247 1 151
Amb_all domain.
pfam00544 Pec_lyase_C 9.19e-05 137 249 52 178
Pectate lyase. This enzyme forms a right handed beta helix structure. Pectate lyase is an enzyme involved in the maceration and soft rotting of plant tissue.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
QUT75604.1 6.73e-167 16 606 7 603
QHL86728.1 2.72e-113 20 600 1 537
ASB47754.1 5.24e-108 47 519 46 464
ALJ01754.1 1.48e-107 31 518 3 460
QNA45667.1 3.29e-105 46 520 23 461

PDB Hits      help

has no PDB hit.

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
Q5B297 1.72e-37 46 524 21 416
Probable pectate lyase C OS=Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) OX=227321 GN=plyC PE=3 SV=1
B8NQQ7 5.83e-37 46 524 21 419
Probable pectate lyase C OS=Aspergillus flavus (strain ATCC 200026 / FGSC A1120 / IAM 13836 / NRRL 3357 / JCM 12722 / SRRC 167) OX=332952 GN=plyC PE=3 SV=1
Q2UB83 3.41e-35 46 524 21 419
Probable pectate lyase C OS=Aspergillus oryzae (strain ATCC 42149 / RIB 40) OX=510516 GN=plyC PE=3 SV=1
A1DPF0 2.25e-34 29 519 4 415
Probable pectate lyase C OS=Neosartorya fischeri (strain ATCC 1020 / DSM 3700 / CBS 544.65 / FGSC A1164 / JCM 1740 / NRRL 181 / WB 181) OX=331117 GN=plyC PE=3 SV=1
B0XMA2 5.72e-34 29 519 4 415
Probable pectate lyase C OS=Neosartorya fumigata (strain CEA10 / CBS 144.89 / FGSC A1163) OX=451804 GN=plyC PE=3 SV=1

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.002057 0.996908 0.000380 0.000247 0.000218 0.000191

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000000956_00685.