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CAZyme Information: MGYG000000956_01810
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Basic Information |
Genomic context |
Full Sequence |
Enzyme annotations |
CAZy signature domains |
CDD domains |
CAZyme hits |
PDB hits |
Swiss-Prot hits |
SignalP and Lipop annotations |
TMHMM annotations
Basic Information help
| Species | Barnesiella sp900538705 | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Lineage | Bacteria; Bacteroidota; Bacteroidia; Bacteroidales; Barnesiellaceae; Barnesiella; Barnesiella sp900538705 | |||||||||||
| CAZyme ID | MGYG000000956_01810 | |||||||||||
| CAZy Family | CE12 | |||||||||||
| CAZyme Description | hypothetical protein | |||||||||||
| CAZyme Property |
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| Genome Property |
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| Gene Location | Start: 96864; End: 98519 Strand: - | |||||||||||
CAZyme Signature Domains help
| Family | Start | End | Evalue | family coverage |
|---|---|---|---|---|
| CE8 | 249 | 532 | 6e-99 | 0.9861111111111112 |
| CE12 | 26 | 234 | 6e-81 | 0.9952380952380953 |
CDD Domains download full data without filtering help
| Cdd ID | Domain | E-Value | qStart | qEnd | sStart | sEnd | Domain Description |
|---|---|---|---|---|---|---|---|
| cd01821 | Rhamnogalacturan_acetylesterase_like | 1.29e-87 | 26 | 234 | 2 | 198 | Rhamnogalacturan_acetylesterase_like subgroup of SGNH-hydrolases. Rhamnogalacturan acetylesterase removes acetyl esters from rhamnogalacturonan substrates, and renders them susceptible to degradation by rhamnogalacturonases. Rhamnogalacturonans are highly branched regions in pectic polysaccharides, consisting of repeating -(1,2)-L-Rha-(1,4)-D-GalUA disaccharide units, with many rhamnose residues substituted by neutral oligosaccharides such as arabinans, galactans and arabinogalactans. Extracellular enzymes participating in the degradation of plant cell wall polymers, such as Rhamnogalacturonan acetylesterase, would typically be found in saprophytic and plant pathogenic fungi and bacteria. |
| pfam01095 | Pectinesterase | 3.08e-84 | 249 | 536 | 1 | 298 | Pectinesterase. |
| PLN02682 | PLN02682 | 2.98e-68 | 248 | 523 | 69 | 349 | pectinesterase family protein |
| PLN02773 | PLN02773 | 8.72e-67 | 252 | 534 | 9 | 292 | pectinesterase |
| COG4677 | PemB | 1.01e-63 | 248 | 536 | 81 | 405 | Pectin methylesterase and related acyl-CoA thioesterases [Carbohydrate transport and metabolism, Lipid transport and metabolism]. |
CAZyme Hits help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End |
|---|---|---|---|---|---|
| QRP57044.1 | 3.18e-236 | 9 | 540 | 11 | 566 |
| QQT77712.1 | 3.18e-236 | 9 | 540 | 11 | 566 |
| QUU07655.1 | 9.06e-236 | 9 | 540 | 11 | 566 |
| ABR39491.1 | 1.17e-232 | 22 | 540 | 20 | 560 |
| QQY38317.1 | 1.17e-232 | 22 | 540 | 20 | 560 |
PDB Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| 1XG2_A | 1.44e-42 | 251 | 535 | 6 | 300 | ChainA, Pectinesterase 1 [Solanum lycopersicum] |
| 1GQ8_A | 1.51e-42 | 249 | 534 | 8 | 297 | Pectinmethylesterase from Carrot [Daucus carota] |
| 5C1E_A | 5.05e-31 | 281 | 510 | 38 | 266 | CrystalStructure of the Pectin Methylesterase from Aspergillus niger in Penultimately Deglycosylated Form (N-acetylglucosamine Stub at Asn84) [Aspergillus niger ATCC 1015] |
| 5C1C_A | 5.05e-31 | 281 | 510 | 38 | 266 | CrystalStructure of the Pectin Methylesterase from Aspergillus niger in Deglycosylated Form [Aspergillus niger ATCC 1015] |
| 3UW0_A | 1.58e-29 | 248 | 486 | 31 | 303 | Pectinmethylesterase from Yersinia enterocolitica [Yersinia enterocolitica subsp. enterocolitica 8081] |
Swiss-Prot Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| Q9FM79 | 6.94e-53 | 250 | 539 | 82 | 377 | Pectinesterase QRT1 OS=Arabidopsis thaliana OX=3702 GN=QRT1 PE=1 SV=1 |
| Q9LVQ0 | 2.68e-52 | 252 | 523 | 9 | 284 | Pectinesterase 31 OS=Arabidopsis thaliana OX=3702 GN=PME31 PE=1 SV=1 |
| Q43062 | 2.16e-51 | 249 | 536 | 208 | 506 | Pectinesterase/pectinesterase inhibitor PPE8B OS=Prunus persica OX=3760 PE=2 SV=1 |
| Q84R10 | 1.36e-48 | 249 | 539 | 205 | 507 | Probable pectinesterase/pectinesterase inhibitor 36 OS=Arabidopsis thaliana OX=3702 GN=PME36 PE=2 SV=2 |
| O49298 | 3.43e-48 | 249 | 536 | 250 | 540 | Probable pectinesterase/pectinesterase inhibitor 6 OS=Arabidopsis thaliana OX=3702 GN=PME6 PE=2 SV=1 |
SignalP and Lipop Annotations help
This protein is predicted as LIPO
| Other | SP_Sec_SPI | LIPO_Sec_SPII | TAT_Tat_SPI | TATLIP_Sec_SPII | PILIN_Sec_SPIII |
|---|---|---|---|---|---|
| 0.000884 | 0.237755 | 0.761066 | 0.000083 | 0.000100 | 0.000097 |