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CAZyme Information: MGYG000000956_01835

You are here: Home > Sequence: MGYG000000956_01835

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Barnesiella sp900538705
Lineage Bacteria; Bacteroidota; Bacteroidia; Bacteroidales; Barnesiellaceae; Barnesiella; Barnesiella sp900538705
CAZyme ID MGYG000000956_01835
CAZy Family CE8
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
1205 132698.29 4.1482
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000000956 2507716 MAG Denmark Europe
Gene Location Start: 10480;  End: 14097  Strand: -

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000000956_01835.

CAZyme Signature Domains help

Family Start End Evalue family coverage
CE8 654 1020 5.6e-54 0.96875

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
COG4677 PemB 2.87e-28 592 1021 32 404
Pectin methylesterase and related acyl-CoA thioesterases [Carbohydrate transport and metabolism, Lipid transport and metabolism].
pfam01095 Pectinesterase 1.68e-25 650 1022 5 298
Pectinesterase.
PLN02432 PLN02432 1.78e-24 656 944 21 222
putative pectinesterase
PRK10531 PRK10531 1.60e-20 765 940 194 351
putative acyl-CoA thioester hydrolase.
PLN02990 PLN02990 6.97e-20 642 947 255 491
Probable pectinesterase/pectinesterase inhibitor

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
QUT77710.1 5.29e-239 148 1204 156 1238
ADY51045.1 6.93e-176 22 1122 25 1032
QCD39271.1 2.30e-171 202 1122 412 1238
QCP72963.1 2.30e-171 202 1122 412 1238
ANU62443.1 2.53e-166 181 1194 722 1628

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
3UW0_A 8.92e-20 657 946 43 277
Pectinmethylesterase from Yersinia enterocolitica [Yersinia enterocolitica subsp. enterocolitica 8081]
2NSP_A 1.19e-19 658 1024 18 338
ChainA, Pectinesterase A [Dickeya dadantii 3937],2NSP_B Chain B, Pectinesterase A [Dickeya dadantii 3937],2NST_A Chain A, Pectinesterase A [Dickeya dadantii 3937],2NST_B Chain B, Pectinesterase A [Dickeya dadantii 3937],2NT6_A Chain A, Pectinesterase A [Dickeya dadantii 3937],2NT6_B Chain B, Pectinesterase A [Dickeya dadantii 3937],2NT9_A Chain A, Pectinesterase A [Dickeya dadantii 3937],2NT9_B Chain B, Pectinesterase A [Dickeya dadantii 3937]
5C1E_A 1.53e-15 656 936 17 223
CrystalStructure of the Pectin Methylesterase from Aspergillus niger in Penultimately Deglycosylated Form (N-acetylglucosamine Stub at Asn84) [Aspergillus niger ATCC 1015]
5C1C_A 6.76e-15 656 936 17 223
CrystalStructure of the Pectin Methylesterase from Aspergillus niger in Deglycosylated Form [Aspergillus niger ATCC 1015]
1GQ8_A 2.22e-13 656 987 17 278
Pectinmethylesterase from Carrot [Daucus carota]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
Q9FJ21 2.48e-18 642 947 254 490
Probable pectinesterase/pectinesterase inhibitor 58 OS=Arabidopsis thaliana OX=3702 GN=PME58 PE=2 SV=1
Q9FKF3 3.05e-16 656 990 51 308
Putative pectinesterase 63 OS=Arabidopsis thaliana OX=3702 GN=PME63 PE=3 SV=2
O48711 2.44e-15 650 1023 241 534
Probable pectinesterase/pectinesterase inhibitor 12 OS=Arabidopsis thaliana OX=3702 GN=PME12 PE=2 SV=1
A2QK82 6.77e-15 656 936 45 251
Probable pectinesterase A OS=Aspergillus niger (strain CBS 513.88 / FGSC A1513) OX=425011 GN=pmeA PE=3 SV=1
Q9LY19 1.33e-14 656 948 74 289
Probable pectinesterase 48 OS=Arabidopsis thaliana OX=3702 GN=PME48 PE=2 SV=2

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.000302 0.998919 0.000209 0.000189 0.000185 0.000160

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000000956_01835.