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CAZyme Information: MGYG000000959_01040
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Basic Information |
Genomic context |
Full Sequence |
Enzyme annotations |
CAZy signature domains |
CDD domains |
CAZyme hits |
PDB hits |
Swiss-Prot hits |
SignalP and Lipop annotations |
TMHMM annotations
Basic Information help
| Species | Ruminococcus sp900752785 | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Lineage | Bacteria; Firmicutes_A; Clostridia; Oscillospirales; Ruminococcaceae; Ruminococcus; Ruminococcus sp900752785 | |||||||||||
| CAZyme ID | MGYG000000959_01040 | |||||||||||
| CAZy Family | CBM4 | |||||||||||
| CAZyme Description | hypothetical protein | |||||||||||
| CAZyme Property |
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| Genome Property |
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| Gene Location | Start: 13215; End: 16436 Strand: + | |||||||||||
CAZyme Signature Domains help
| Family | Start | End | Evalue | family coverage |
|---|---|---|---|---|
| GH9 | 294 | 721 | 3.8e-114 | 0.992822966507177 |
| GH16 | 861 | 1061 | 4.9e-85 | 0.9805825242718447 |
| CBM4 | 35 | 160 | 8.5e-35 | 0.9920634920634921 |
CDD Domains download full data without filtering help
| Cdd ID | Domain | E-Value | qStart | qEnd | sStart | sEnd | Domain Description |
|---|---|---|---|---|---|---|---|
| cd02175 | GH16_lichenase | 3.40e-111 | 860 | 1064 | 3 | 210 | lichenase, member of glycosyl hydrolase family 16. Lichenase, also known as 1,3-1,4-beta-glucanase, is a member of glycosyl hydrolase family 16, that specifically cleaves 1,4-beta-D-glucosidic bonds in mixed-linked beta glucans that also contain 1,3-beta-D-glucosidic linkages. Natural substrates of beta-glucanase are beta-glucans from grain endosperm cell walls or lichenan from the Islandic moss, Cetraria islandica. This protein is found not only in bacteria but also in anaerobic fungi. This domain includes two seven-stranded antiparallel beta-sheets that are adjacent to one another forming a compact, jellyroll beta-sandwich structure. |
| pfam00759 | Glyco_hydro_9 | 5.22e-88 | 296 | 721 | 1 | 374 | Glycosyl hydrolase family 9. |
| COG2273 | BglS | 3.42e-50 | 856 | 1064 | 42 | 264 | Beta-glucanase, GH16 family [Carbohydrate transport and metabolism]. |
| pfam00722 | Glyco_hydro_16 | 1.81e-49 | 886 | 1053 | 1 | 163 | Glycosyl hydrolases family 16. |
| cd00413 | Glyco_hydrolase_16 | 1.92e-44 | 860 | 1061 | 1 | 204 | glycosyl hydrolase family 16. The O-Glycosyl hydrolases are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A glycosyl hydrolase classification system based on sequence similarity has led to the definition of more than 95 different families inlcuding glycosyl hydrolase family 16. Family 16 includes lichenase, xyloglucan endotransglycosylase (XET), beta-agarase, kappa-carrageenase, endo-beta-1,3-glucanase, endo-beta-1,3-1,4-glucanase, and endo-beta-galactosidase, all of which have a conserved jelly roll fold with a deep active site channel harboring the catalytic residues. |
CAZyme Hits help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End |
|---|---|---|---|---|---|
| CBL16782.1 | 0.0 | 1 | 1067 | 1 | 1049 |
| AGF55906.1 | 3.31e-212 | 35 | 722 | 38 | 722 |
| AQR94654.1 | 4.68e-212 | 35 | 722 | 38 | 722 |
| AUK47910.1 | 1.03e-204 | 35 | 724 | 38 | 723 |
| AAT66046.1 | 2.56e-204 | 33 | 722 | 32 | 719 |
PDB Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| 4CJ0_A | 1.31e-88 | 196 | 757 | 25 | 576 | ChainA, ENDOGLUCANASE D [Acetivibrio thermocellus],4CJ1_A Chain A, ENDOGLUCANASE D [Acetivibrio thermocellus] |
| 1CLC_A | 1.85e-88 | 196 | 757 | 39 | 590 | ChainA, ENDOGLUCANASE CELD; EC: 3.2.1.4 [Acetivibrio thermocellus] |
| 5E2J_A | 7.07e-84 | 190 | 726 | 15 | 556 | Crystalstructure of single mutant thermostable endoglucanase (D468A) from Alicyclobacillus acidocaldarius [Alicyclobacillus acidocaldarius subsp. acidocaldarius],5E2J_B Crystal structure of single mutant thermostable endoglucanase (D468A) from Alicyclobacillus acidocaldarius [Alicyclobacillus acidocaldarius subsp. acidocaldarius] |
| 3EZ8_A | 7.89e-84 | 204 | 726 | 12 | 533 | CrystalStructure of endoglucanase Cel9A from the thermoacidophilic Alicyclobacillus acidocaldarius [Alicyclobacillus acidocaldarius subsp. acidocaldarius],3GZK_A Structure of A. Acidocaldarius Cellulase CelA [Alicyclobacillus acidocaldarius subsp. acidocaldarius],3H2W_A Structure of A. acidocaldarius cellulase CelA in complex with cellobiose [Alicyclobacillus acidocaldarius subsp. acidocaldarius],3H3K_A Structure of A. acidocaldarius cellulase CelA in complex with cellotetraose [Alicyclobacillus acidocaldarius subsp. acidocaldarius],3RX5_A structure of AaCel9A in complex with cellotriose-like isofagomine [Alicyclobacillus acidocaldarius subsp. acidocaldarius],3RX7_A Structure of AaCel9A in complex with cellotetraose-like isofagomine [Alicyclobacillus acidocaldarius subsp. acidocaldarius],3RX8_A structure of AaCel9A in complex with cellobiose-like isofagomine [Alicyclobacillus acidocaldarius subsp. acidocaldarius] |
| 3WVJ_A | 6.02e-82 | 854 | 1068 | 4 | 217 | ChainA, Beta-glucanase [Acetivibrio thermocellus ATCC 27405],3WVJ_B Chain B, Beta-glucanase [Acetivibrio thermocellus ATCC 27405] |
Swiss-Prot Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| Q53317 | 4.43e-122 | 720 | 1072 | 409 | 794 | Xylanase/beta-glucanase OS=Ruminococcus flavefaciens OX=1265 GN=xynD PE=3 SV=2 |
| P23658 | 5.23e-93 | 203 | 722 | 6 | 543 | Cellodextrinase OS=Butyrivibrio fibrisolvens OX=831 GN=ced1 PE=1 SV=1 |
| A3DCH1 | 7.74e-89 | 35 | 757 | 41 | 849 | Cellulose 1,4-beta-cellobiosidase OS=Acetivibrio thermocellus (strain ATCC 27405 / DSM 1237 / JCM 9322 / NBRC 103400 / NCIMB 10682 / NRRL B-4536 / VPI 7372) OX=203119 GN=celK PE=3 SV=1 |
| P0C2S4 | 7.16e-88 | 196 | 757 | 25 | 576 | Endoglucanase D (Fragment) OS=Acetivibrio thermocellus OX=1515 GN=celD PE=1 SV=1 |
| P0C2S1 | 1.36e-87 | 35 | 757 | 41 | 849 | Cellulose 1,4-beta-cellobiosidase OS=Acetivibrio thermocellus OX=1515 GN=celK PE=1 SV=1 |
SignalP and Lipop Annotations help
This protein is predicted as SP
| Other | SP_Sec_SPI | LIPO_Sec_SPII | TAT_Tat_SPI | TATLIP_Sec_SPII | PILIN_Sec_SPIII |
|---|---|---|---|---|---|
| 0.000325 | 0.998868 | 0.000181 | 0.000222 | 0.000190 | 0.000162 |
