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CAZyme Information: MGYG000000964_01065

You are here: Home > Sequence: MGYG000000964_01065

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Phocaeicola salanitronis
Lineage Bacteria; Bacteroidota; Bacteroidia; Bacteroidales; Bacteroidaceae; Phocaeicola; Phocaeicola salanitronis
CAZyme ID MGYG000000964_01065
CAZy Family PL10
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
708 80954.85 7.2801
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000000964 3100012 MAG Denmark Europe
Gene Location Start: 9189;  End: 11315  Strand: -

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000000964_01065.

CAZyme Signature Domains help

Family Start End Evalue family coverage
PL10 62 353 8.3e-112 0.9965277777777778
CE8 407 638 1.2e-28 0.7847222222222222

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
pfam09492 Pec_lyase 9.97e-154 62 354 1 289
Pectic acid lyase. Members of this family are isozymes of pectate lyase (EC:4.2.2.2), also called polygalacturonic transeliminase and alpha-1,4-D-endopolygalacturonic acid lyase.
TIGR02474 pec_lyase 1.19e-104 62 353 1 289
pectate lyase, PelA/Pel-15E family. Members of this family are isozymes of pectate lyase (EC 4.2.2.2), also called polygalacturonic transeliminase and alpha-1,4-D-endopolygalacturonic acid lyase. [Energy metabolism, Biosynthesis and degradation of polysaccharides]
COG4677 PemB 1.75e-07 406 656 95 371
Pectin methylesterase and related acyl-CoA thioesterases [Carbohydrate transport and metabolism, Lipid transport and metabolism].
pfam01095 Pectinesterase 5.05e-07 399 611 1 218
Pectinesterase.
PLN02488 PLN02488 6.04e-05 386 562 185 350
probable pectinesterase/pectinesterase inhibitor

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
ADY37490.1 0.0 1 708 1 708
ALJ61703.1 0.0 17 708 16 707
QUT92735.1 0.0 17 707 16 706
QQY38928.1 0.0 35 708 40 713
ABR38807.1 0.0 35 708 40 713

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
1R76_A 1.59e-52 26 363 60 407
ChainA, pectate lyase [Niveispirillum irakense]
1GXM_A 1.38e-48 58 345 40 314
Family10 polysaccharide lyase from Cellvibrio cellulosa [Cellvibrio japonicus],1GXM_B Family 10 polysaccharide lyase from Cellvibrio cellulosa [Cellvibrio japonicus],1GXN_A Family 10 polysaccharide lyase from Cellvibrio cellulosa [Cellvibrio japonicus]
1GXO_A 1.80e-47 58 345 40 314
MutantD189A of Family 10 polysaccharide lyase from Cellvibrio cellulosa in complex with trigalaturonic acid [Cellvibrio japonicus]
2NSP_A 3.11e-06 411 610 24 205
ChainA, Pectinesterase A [Dickeya dadantii 3937],2NSP_B Chain B, Pectinesterase A [Dickeya dadantii 3937],2NST_A Chain A, Pectinesterase A [Dickeya dadantii 3937],2NST_B Chain B, Pectinesterase A [Dickeya dadantii 3937],2NT6_A Chain A, Pectinesterase A [Dickeya dadantii 3937],2NT6_B Chain B, Pectinesterase A [Dickeya dadantii 3937],2NT9_A Chain A, Pectinesterase A [Dickeya dadantii 3937],2NT9_B Chain B, Pectinesterase A [Dickeya dadantii 3937]

Swiss-Prot Hits      help

has no Swissprot hit.

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.015784 0.751612 0.222019 0.009350 0.000791 0.000398

TMHMM  Annotations      download full data without filtering help

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