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CAZyme Information: MGYG000000964_01304

You are here: Home > Sequence: MGYG000000964_01304

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Phocaeicola salanitronis
Lineage Bacteria; Bacteroidota; Bacteroidia; Bacteroidales; Bacteroidaceae; Phocaeicola; Phocaeicola salanitronis
CAZyme ID MGYG000000964_01304
CAZy Family PL15
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
879 MGYG000000964_24|CGC1 99381.44 4.5395
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000000964 3100012 MAG Denmark Europe
Gene Location Start: 7846;  End: 10485  Strand: -

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000000964_01304.

CAZyme Signature Domains help

Family Start End Evalue family coverage
PL15 536 692 5.5e-50 0.9850746268656716

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
pfam16332 DUF4962 5.61e-76 82 489 8 447
Domain of unknown function (DUF4962). This family consists of uncharacterized proteins around 870 residues in length and is mainly found in various Bacteroides species. The function of this protein is unknown.
pfam07940 Hepar_II_III 4.34e-09 540 705 18 163
Heparinase II/III-like protein. This family features sequences that are similar to a region of the Flavobacterium heparinum proteins heparinase II and heparinase III. The former is known to degrade heparin and heparin sulphate, whereas the latter predominantly degrades heparin sulphate. Both are secreted into the periplasmic space upon induction with heparin.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
QIU94214.1 0.0 52 877 18 847
QGT73302.1 0.0 52 876 18 844
CBK68010.1 0.0 52 876 5 831
QUT32653.1 0.0 52 876 18 844
QNL40851.1 0.0 52 876 18 844

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
6LJA_A 1.49e-103 82 872 38 864
ChainA, Heparinase II/III-like protein [Bacteroides intestinalis DSM 17393]
6LJL_A 7.86e-101 82 872 38 864
ChainA, Heparinase II/III-like protein [Bacteroides intestinalis DSM 17393]
3A0O_A 7.57e-25 296 706 259 661
Crystalstructure of alginate lyase from Agrobacterium tumefaciens C58 [Agrobacterium fabrum str. C58],3A0O_B Crystal structure of alginate lyase from Agrobacterium tumefaciens C58 [Agrobacterium fabrum str. C58]
3AFL_A 1.21e-23 296 706 259 661
Crystalstructure of exotype alginate lyase Atu3025 H531A complexed with alginate trisaccharide [Agrobacterium fabrum str. C58]

Swiss-Prot Hits      help

has no Swissprot hit.

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.295210 0.371119 0.331013 0.000280 0.002010 0.000357

TMHMM  Annotations      download full data without filtering help

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