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CAZyme Information: MGYG000000964_02362

You are here: Home > Sequence: MGYG000000964_02362

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Phocaeicola salanitronis
Lineage Bacteria; Bacteroidota; Bacteroidia; Bacteroidales; Bacteroidaceae; Phocaeicola; Phocaeicola salanitronis
CAZyme ID MGYG000000964_02362
CAZy Family GH28
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
477 MGYG000000964_76|CGC1 53357.63 7.745
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000000964 3100012 MAG Denmark Europe
Gene Location Start: 6956;  End: 8389  Strand: -

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000000964_02362.

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH28 174 443 8.5e-32 0.7876923076923077

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
pfam00295 Glyco_hydro_28 0.009 261 410 139 274
Glycosyl hydrolases family 28. Glycosyl hydrolase family 28 includes polygalacturonase EC:3.2.1.15 as well as rhamnogalacturonase A(RGase A), EC:3.2.1.-. These enzymes are important in cell wall metabolism.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
QEW35608.1 3.82e-250 28 477 26 477
QJR65187.1 7.70e-250 1 477 1 477
QJR73783.1 7.70e-250 1 477 1 477
QJR69450.1 7.70e-250 1 477 1 477
AII64697.1 2.29e-249 27 477 25 478

PDB Hits      help

has no PDB hit.

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
B0Y9F8 6.57e-06 179 401 99 337
Probable endo-xylogalacturonan hydrolase A OS=Neosartorya fumigata (strain CEA10 / CBS 144.89 / FGSC A1163) OX=451804 GN=xghA PE=3 SV=2

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.001456 0.708292 0.289322 0.000450 0.000237 0.000208

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000000964_02362.