logo
sublogo
You are browsing environment: HUMAN GUT
help

CAZyme Information: MGYG000000971_00480

You are here: Home > Sequence: MGYG000000971_00480

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species UMGS1518 sp900552575
Lineage Bacteria; Verrucomicrobiota; Lentisphaeria; Victivallales; Victivallaceae; UMGS1518; UMGS1518 sp900552575
CAZyme ID MGYG000000971_00480
CAZy Family GH28
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
510 MGYG000000971_21|CGC1 56256.31 4.8114
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000000971 3501016 MAG Australia Oceania
Gene Location Start: 3786;  End: 5318  Strand: -

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000000971_00480.

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH28 207 486 4.8e-29 0.6953846153846154

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
COG5434 Pgu1 2.83e-05 242 343 246 340
Polygalacturonase [Carbohydrate transport and metabolism].
pfam00295 Glyco_hydro_28 1.62e-04 191 405 46 242
Glycosyl hydrolases family 28. Glycosyl hydrolase family 28 includes polygalacturonase EC:3.2.1.15 as well as rhamnogalacturonase A(RGase A), EC:3.2.1.-. These enzymes are important in cell wall metabolism.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
BCI63341.1 3.78e-131 36 507 268 749
BCI63342.1 2.49e-128 7 490 9 509
QNK57052.1 4.62e-100 64 497 52 479
QMV67078.1 1.66e-93 41 484 41 471
QTH41143.1 1.34e-83 12 497 9 482

PDB Hits      help

has no PDB hit.

Swiss-Prot Hits      help

has no Swissprot hit.

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.001084 0.518819 0.479343 0.000249 0.000251 0.000235

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000000971_00480.