Species | UMGS1490 sp900552245 | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|
Lineage | Bacteria; Verrucomicrobiota; Verrucomicrobiae; Opitutales; CAG-312; UMGS1490; UMGS1490 sp900552245 | |||||||||||
CAZyme ID | MGYG000000973_01356 | |||||||||||
CAZy Family | GT83 | |||||||||||
CAZyme Description | Undecaprenyl phosphate-alpha-4-amino-4-deoxy-L-arabinose arabinosyl transferase | |||||||||||
CAZyme Property |
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Genome Property |
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Gene Location | Start: 5183; End: 7015 Strand: + |
Family | Start | End | Evalue | family coverage |
---|---|---|---|---|
GT83 | 10 | 563 | 1.5e-115 | 0.9296296296296296 |
Cdd ID | Domain | E-Value | qStart | qEnd | sStart | sEnd | Domain Description |
---|---|---|---|---|---|---|---|
COG1807 | ArnT | 2.33e-57 | 9 | 508 | 5 | 451 | 4-amino-4-deoxy-L-arabinose transferase or related glycosyltransferase of PMT family [Cell wall/membrane/envelope biogenesis]. |
PRK13279 | arnT | 2.42e-47 | 14 | 480 | 9 | 424 | lipid IV(A) 4-amino-4-deoxy-L-arabinosyltransferase. |
pfam13231 | PMT_2 | 4.98e-17 | 68 | 236 | 2 | 157 | Dolichyl-phosphate-mannose-protein mannosyltransferase. This family contains members that are not captured by pfam02366. |
pfam02366 | PMT | 6.82e-15 | 41 | 241 | 34 | 235 | Dolichyl-phosphate-mannose-protein mannosyltransferase. This is a family of Dolichyl-phosphate-mannose-protein mannosyltransferase proteins EC:2.4.1.109. These proteins are responsible for O-linked glycosylation of proteins, they catalyze the reaction:- Dolichyl phosphate D-mannose + protein <=> dolichyl phosphate + O-D-mannosyl-protein. Also in this family is Drosophila rotated abdomen protein which is a putative mannosyltransferase. This family appears to be distantly related to pfam02516 (A Bateman pers. obs.). This family also contains sequences from ArnTs (4-amino-4-deoxy-L-arabinose lipid A transferase). They catalyze the addition of 4-amino-4-deoxy-l-arabinose (l-Ara4N) to the lipid A moiety of the lipopolysaccharide. This is a critical modification enabling bacteria (e.g. Escherichia coli and Salmonella typhimurium) to resist killing by antimicrobial peptides such as polymyxins. Members such as undecaprenyl phosphate-alpha-4-amino-4-deoxy-L-arabinose arabinosyl transferase are predicted to have 12 trans-membrane regions. The N-terminal portion of these proteins is hypothesized to have a conserved glycosylation activity which is shared between distantly related oligosaccharyltransferases ArnT and PglB families. |
COG1928 | PMT1 | 1.50e-05 | 67 | 311 | 89 | 302 | Dolichyl-phosphate-mannose--protein O-mannosyl transferase [Posttranslational modification, protein turnover, chaperones]. |
Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End |
---|---|---|---|---|---|
AWP22111.1 | 1.09e-87 | 3 | 536 | 20 | 502 |
BAV32474.1 | 1.30e-84 | 19 | 534 | 1 | 469 |
QYM78945.1 | 2.59e-80 | 14 | 500 | 19 | 456 |
ABB31129.1 | 5.83e-80 | 3 | 607 | 10 | 553 |
AWI08836.1 | 6.62e-79 | 3 | 565 | 98 | 612 |
Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
---|---|---|---|---|---|---|
5EZM_A | 5.68e-41 | 14 | 396 | 34 | 370 | CrystalStructure of ArnT from Cupriavidus metallidurans in the apo state [Cupriavidus metallidurans CH34],5F15_A Crystal Structure of ArnT from Cupriavidus metallidurans bound to Undecaprenyl phosphate [Cupriavidus metallidurans CH34] |
Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
---|---|---|---|---|---|---|
B4ETL9 | 1.65e-40 | 1 | 448 | 1 | 398 | Undecaprenyl phosphate-alpha-4-amino-4-deoxy-L-arabinose arabinosyl transferase 2 OS=Proteus mirabilis (strain HI4320) OX=529507 GN=arnT2 PE=3 SV=1 |
Q6D2F3 | 2.81e-39 | 5 | 419 | 2 | 364 | Undecaprenyl phosphate-alpha-4-amino-4-deoxy-L-arabinose arabinosyl transferase OS=Pectobacterium atrosepticum (strain SCRI 1043 / ATCC BAA-672) OX=218491 GN=arnT PE=3 SV=1 |
C6DAW3 | 7.11e-39 | 5 | 483 | 2 | 423 | Undecaprenyl phosphate-alpha-4-amino-4-deoxy-L-arabinose arabinosyl transferase OS=Pectobacterium carotovorum subsp. carotovorum (strain PC1) OX=561230 GN=arnT PE=3 SV=1 |
A1JPM4 | 1.29e-38 | 22 | 423 | 12 | 367 | Undecaprenyl phosphate-alpha-4-amino-4-deoxy-L-arabinose arabinosyl transferase OS=Yersinia enterocolitica serotype O:8 / biotype 1B (strain NCTC 13174 / 8081) OX=393305 GN=arnT PE=3 SV=1 |
A4SQX1 | 4.05e-38 | 22 | 568 | 13 | 503 | Undecaprenyl phosphate-alpha-4-amino-4-deoxy-L-arabinose arabinosyl transferase OS=Aeromonas salmonicida (strain A449) OX=382245 GN=arnT PE=3 SV=1 |
Other | SP_Sec_SPI | LIPO_Sec_SPII | TAT_Tat_SPI | TATLIP_Sec_SPII | PILIN_Sec_SPIII |
---|---|---|---|---|---|
1.000020 | 0.000002 | 0.000000 | 0.000000 | 0.000000 | 0.000000 |
start | end |
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13 | 35 |
88 | 110 |
117 | 139 |
144 | 161 |
168 | 185 |
189 | 208 |
221 | 243 |
288 | 310 |
350 | 367 |
371 | 393 |
406 | 428 |
443 | 462 |
469 | 488 |
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