CAZyme Information: MGYG000000977_00873

Basic Information

• Species: Clostridium sp900539375
• Lineage: Bacteria; Firmicutes_A; Clostridia; Clostridiales; Clostridiaceae; Clostridium; Clostridium sp900539375
• CAZyme ID: MGYG000000977_00873
• CAZy Family: GH25
• CAZyme Description: hypothetical protein

CAZyme Property

Protein Length	CGC	Molecular Weight	Isoelectric Point
315		36781.54	5.2907

Genome Property

Genome Assembly ID	Genome Size	Genome Type	Country	Continent
MGYG000000977	2927434	MAG	Australia	Oceania

• Gene Location: Start: 44334; End: 45281 Strand: -

Full Sequence      

MQNKNPNSLFGIDINEYTQGVDFNILARKIDFLYLRSSGSGSGRFRVDRKFLEYAETSRN
YKIPVGAYHYALPSWDLNTADMQCDDFLRILQEGFGNKDYGDLFPALDVEEPIDKSLTTK
ALINWIDRFRKRFERKSRRRLMLYTGSFFIDLYDNFYIEGKGYPLKSMPLWIAMYTKYPG
NPPYPSNQGGWTRWRIWQFSEDFKIEGVGNPVDANWGPNNIDLLMQPDIVSGFRVRTEGN
KIILNWNRNKNIDLLGYNIFANNYWIGTVDEEDTEFVFNKDILNVPENSIVKITIEAFDY
DGETSKRRASVDLKV

Enzyme Prediction     

No EC number prediction in MGYG000000977_00873.

CAZyme Signature Domains

Family	Start	End	Evalue	family coverage
GH25	12	208	4.1e-36	0.9943502824858758

CDD Domains     

Cdd ID	Domain	E-Value	qStart	qEnd	sStart	sEnd	Domain Description
cd00599	GH25_muramidase	6.59e-42	11	216	2	185	Endo-N-acetylmuramidases (muramidases) are lysozymes (also referred to as peptidoglycan hydrolases) that degrade bacterial cell walls by catalyzing the hydrolysis of 1,4-beta-linkages between N-acetylmuramic acid and N-acetyl-D-glucosamine residues. This family of muramidases contains a glycosyl hydrolase family 25 (GH25) catalytic domain and is found in bacteria, fungi, slime molds, round worms, protozoans and bacteriophages. The bacteriophage members are referred to as endolysins which are involved in lysing the host cell at the end of the replication cycle to allow release of mature phage particles. Endolysins are typically modular enzymes consisting of a catalytically active domain that hydrolyzes the peptidoglycan cell wall and a cell wall-binding domain that anchors the protein to the cell wall. Endolysins generally have narrow substrate specificities with either intra-species or intra-genus bacteriolytic activity.
cd06524	GH25_YegX-like	3.28e-32	10	215	1	190	YegX is an uncharacterized bacterial protein with a glycosyl hydrolase family 25 (GH25) catalytic domain that is similar in sequence to the CH-type (Chalaropsis-type) lysozymes of the GH25 family of endolysins.
pfam01183	Glyco_hydro_25	3.18e-28	12	208	1	180	Glycosyl hydrolases family 25.
cd06525	GH25_Lyc-like	5.59e-25	11	215	2	182	Lyc muramidase is an autolytic lysozyme (autolysin) from Clostridium acetobutylicum encoded by the lyc gene. Lyc has a glycosyl hydrolase family 25 (GH25) catalytic domain. Endo-N-acetylmuramidases are lysozymes (also referred to as peptidoglycan hydrolases) that degrade bacterial cell walls by catalyzing the hydrolysis of 1,4-beta-linkages between N-acetylmuramic acid and N-acetyl-D-glucosamine residues.
COG3757	Acm	5.25e-18	11	215	65	251	Lyzozyme M1 (1,4-beta-N-acetylmuramidase), GH25 family [Cell wall/membrane/envelope biogenesis].

CAZyme Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End
ACD23769.1	2.76e-172	1	314	1	314
CDH91977.1	2.76e-172	1	314	1	314
AIY81814.1	6.84e-172	1	314	1	314
AJF33700.1	7.14e-171	1	313	1	313
ACD51768.1	7.14e-171	1	313	1	313

PDB Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
5JIP_A	8.77e-133	2	308	7	313	Crystalstructure of the Clostridium perfringens spore cortex lytic enzyme SleM [Clostridium perfringens],5JIP_B Crystal structure of the Clostridium perfringens spore cortex lytic enzyme SleM [Clostridium perfringens]

Swiss-Prot Hits     

has no Swissprot hit.

SignalP and Lipop Annotations

This protein is predicted as OTHER

Other	SP_Sec_SPI	LIPO_Sec_SPII	TAT_Tat_SPI	TATLIP_Sec_SPII	PILIN_Sec_SPIII
1.000053	0.000000	0.000000	0.000000	0.000000	0.000000

TMHMM  Annotations     

There is no transmembrane helices in MGYG000000977_00873.