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CAZyme Information: MGYG000000989_01238
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Basic Information |
Genomic context |
Full Sequence |
Enzyme annotations |
CAZy signature domains |
CDD domains |
CAZyme hits |
PDB hits |
Swiss-Prot hits |
SignalP and Lipop annotations |
TMHMM annotations
Basic Information help
| Species | Niameybacter sp900549765 | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Lineage | Bacteria; Firmicutes_A; Clostridia; Lachnospirales; Cellulosilyticaceae; Niameybacter; Niameybacter sp900549765 | |||||||||||
| CAZyme ID | MGYG000000989_01238 | |||||||||||
| CAZy Family | GH26 | |||||||||||
| CAZyme Description | hypothetical protein | |||||||||||
| CAZyme Property |
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| Genome Property |
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| Gene Location | Start: 36958; End: 38544 Strand: + | |||||||||||
CAZyme Signature Domains help
| Family | Start | End | Evalue | family coverage |
|---|---|---|---|---|
| GH26 | 210 | 369 | 1.1e-29 | 0.47194719471947194 |
CDD Domains download full data without filtering help
| Cdd ID | Domain | E-Value | qStart | qEnd | sStart | sEnd | Domain Description |
|---|---|---|---|---|---|---|---|
| COG4124 | ManB2 | 1.58e-13 | 227 | 341 | 179 | 294 | Beta-mannanase [Carbohydrate transport and metabolism]. |
| pfam02156 | Glyco_hydro_26 | 9.41e-11 | 214 | 302 | 137 | 230 | Glycosyl hydrolase family 26. |
| sd00006 | TPR | 3.92e-05 | 20 | 76 | 38 | 94 | Tetratricopeptide repeat. The Tetratricopeptide repeat (TPR) typically contains 34 amino acids and is found in a variety of organisms including bacteria, cyanobacteria, yeast, fungi, plants, and humans. It is present in a variety of proteins including those involved in chaperone, cell-cycle, transcription, and protein transport complexes. The number of TPR motifs varies among proteins. Those containing 5-6 tandem repeats generate a right-handed helical structure with an amphipathic channel that is thought to accommodate an alpha-helix of a target protein. It has been proposed that TPR proteins preferentially interact with WD-40 repeat proteins, but in many instances several TPR-proteins seem to aggregate to multi-protein complexes. |
| sd00006 | TPR | 4.20e-05 | 20 | 86 | 4 | 70 | Tetratricopeptide repeat. The Tetratricopeptide repeat (TPR) typically contains 34 amino acids and is found in a variety of organisms including bacteria, cyanobacteria, yeast, fungi, plants, and humans. It is present in a variety of proteins including those involved in chaperone, cell-cycle, transcription, and protein transport complexes. The number of TPR motifs varies among proteins. Those containing 5-6 tandem repeats generate a right-handed helical structure with an amphipathic channel that is thought to accommodate an alpha-helix of a target protein. It has been proposed that TPR proteins preferentially interact with WD-40 repeat proteins, but in many instances several TPR-proteins seem to aggregate to multi-protein complexes. |
| pfam17957 | Big_7 | 1.03e-04 | 449 | 509 | 8 | 67 | Bacterial Ig domain. This entry represents a bacterial ig-like domain that is found in glycosyl hydrolase enzymes. |
CAZyme Hits help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End |
|---|---|---|---|---|---|
| ADC49280.1 | 3.27e-129 | 16 | 528 | 26 | 523 |
| QPC47538.1 | 2.87e-114 | 18 | 517 | 30 | 513 |
| QKS72465.1 | 3.99e-106 | 2 | 522 | 17 | 516 |
| AIS53445.1 | 8.12e-87 | 114 | 477 | 40 | 373 |
| AEM79915.1 | 3.19e-86 | 114 | 440 | 40 | 348 |
PDB Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| 2DDX_A | 6.58e-09 | 229 | 310 | 108 | 192 | Crystalstructure of beta-1,3-xylanase from Vibrio sp. AX-4 [Vibrio sp. AX-4],3VPL_A Crystal structure of a 2-fluoroxylotriosyl complex of the Vibrio sp. AX-4 Beta-1,3-xylanase [Vibrio sp.] |
| 3WDQ_A | 7.18e-08 | 221 | 351 | 186 | 309 | Crystalstructure of beta-mannanase from a symbiotic protist of the termite Reticulitermes speratus [Symbiotic protist of Reticulitermes speratus],3WDR_A Crystal structure of beta-mannanase from a symbiotic protist of the termite Reticulitermes speratus complexed with gluco-manno-oligosaccharide [Symbiotic protist of Reticulitermes speratus] |
| 6HF2_A | 7.26e-07 | 202 | 302 | 157 | 263 | Thestructure of BoMan26B, a GH26 beta-mannanase from Bacteroides ovatus [Bacteroides ovatus ATCC 8483],6HF4_A The structure of BoMan26B, a GH26 beta-mannanase from Bacteroides ovatus, complexed with G1M4 [Bacteroides ovatus ATCC 8483] |
| 7EET_A | 6.57e-06 | 221 | 303 | 171 | 263 | ChainA, Mannanase KMAN [Klebsiella oxytoca] |
Swiss-Prot Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| D5MP61 | 6.60e-08 | 229 | 310 | 130 | 214 | Beta-1,3-xylanase XYL4 OS=Vibrio sp. OX=678 GN=xyl4 PE=1 SV=1 |
| P16699 | 7.49e-07 | 221 | 378 | 179 | 321 | Mannan endo-1,4-beta-mannosidase A and B OS=Caldalkalibacillus mannanilyticus (strain DSM 16130 / CIP 109019 / JCM 10596 / AM-001) OX=1236954 PE=1 SV=1 |
| Q8RS40 | 2.14e-06 | 216 | 310 | 117 | 214 | Beta-1,3-xylanase OS=Alcaligenes sp. OX=512 GN=txyA PE=1 SV=1 |
| Q9LCB9 | 4.88e-06 | 229 | 310 | 130 | 214 | Beta-1,3-xylanase TXYA OS=Vibrio sp. OX=678 GN=txyA PE=1 SV=1 |
SignalP and Lipop Annotations help
This protein is predicted as OTHER
| Other | SP_Sec_SPI | LIPO_Sec_SPII | TAT_Tat_SPI | TATLIP_Sec_SPII | PILIN_Sec_SPIII |
|---|---|---|---|---|---|
| 0.993089 | 0.006927 | 0.000016 | 0.000007 | 0.000005 | 0.000007 |