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CAZyme Information: MGYG000000993_00646

You are here: Home > Sequence: MGYG000000993_00646

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Haemophilus_D sp900756155
Lineage Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales; Pasteurellaceae; Haemophilus_D; Haemophilus_D sp900756155
CAZyme ID MGYG000000993_00646
CAZy Family GH3
CAZyme Description Beta-hexosaminidase
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
347 MGYG000000993_3|CGC1 38929.54 5.9288
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000000993 1983283 MAG Denmark Europe
Gene Location Start: 45759;  End: 46802  Strand: -

Full Sequence      Download help

Enzyme Prediction      help

EC 3.2.1.52

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH3 51 278 2.2e-53 0.9722222222222222

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
PRK05337 PRK05337 0.0 1 344 1 337
beta-hexosaminidase; Provisional
pfam00933 Glyco_hydro_3 4.15e-122 4 312 10 316
Glycosyl hydrolase family 3 N terminal domain.
COG1472 BglX 1.86e-114 1 316 5 312
Periplasmic beta-glucosidase and related glycosidases [Carbohydrate transport and metabolism].
cd01825 SGNH_hydrolase_peri1 0.006 39 109 80 147
SGNH_peri1; putative periplasmic member of the SGNH-family of hydrolases, a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
QOR08030.1 3.25e-250 1 347 1 347
QOR24688.1 3.11e-248 1 347 1 347
QOR09876.1 1.27e-247 1 347 1 347
QOR06181.1 1.27e-247 1 347 1 347
QAT94914.1 1.27e-247 1 347 1 347

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
4GVF_A 3.74e-122 1 347 1 338
Crystalstructure of Salmonella typhimurium family 3 glycoside hydrolase (NagZ) bound to GlcNAc [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2],4GVF_B Crystal structure of Salmonella typhimurium family 3 glycoside hydrolase (NagZ) bound to GlcNAc [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2],4GVG_A Crystal structure of Salmonella typhimurium family 3 glycoside hydrolase (NagZ) [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2],4GVG_B Crystal structure of Salmonella typhimurium family 3 glycoside hydrolase (NagZ) [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2],4GVH_A Crystal structure of Salmonella typhimurium family 3 glycoside hydrolase (NagZ) covalently bound to 5-fluoro-GlcNAc. [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2],4GVH_B Crystal structure of Salmonella typhimurium family 3 glycoside hydrolase (NagZ) covalently bound to 5-fluoro-GlcNAc. [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2],4HZM_A Crystal structure of Salmonella typhimurium family 3 glycoside hydrolase (NagZ) bound to N-[(3S,4R,5R,6R)-4,5-dihydroxy-6-(hydroxymethyl)piperidin-3-yl]butanamide [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2],4HZM_B Crystal structure of Salmonella typhimurium family 3 glycoside hydrolase (NagZ) bound to N-[(3S,4R,5R,6R)-4,5-dihydroxy-6-(hydroxymethyl)piperidin-3-yl]butanamide [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2]
4GVI_A 2.14e-121 1 347 1 338
Crystalstructure of mutant (D248N) Salmonella typhimurium family 3 glycoside hydrolase (NagZ) in complex with GlcNAc-1,6-anhMurNAc [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2],4GVI_B Crystal structure of mutant (D248N) Salmonella typhimurium family 3 glycoside hydrolase (NagZ) in complex with GlcNAc-1,6-anhMurNAc [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2]
2OXN_A 2.24e-121 1 329 1 314
Vibriocholerae family 3 glycoside hydrolase (NagZ) in complex with PUGNAc [Vibrio cholerae]
1Y65_A 6.83e-121 1 329 3 316
Crystalstructure of beta-hexosaminidase from Vibrio cholerae in complex with N-acetyl-D-glucosamine to a resolution of 1.85 [Vibrio cholerae]
3GS6_A 4.21e-119 1 329 1 314
ChainA, Beta-hexosaminidase [Vibrio cholerae],3GSM_A Chain A, Beta-hexosaminidase [Vibrio cholerae]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
Q65VK7 1.93e-204 1 347 1 347
Beta-hexosaminidase OS=Mannheimia succiniciproducens (strain MBEL55E) OX=221988 GN=nagZ PE=3 SV=1
A6VKU4 3.26e-198 1 346 1 346
Beta-hexosaminidase OS=Actinobacillus succinogenes (strain ATCC 55618 / DSM 22257 / CCUG 43843 / 130Z) OX=339671 GN=nagZ PE=3 SV=1
Q9CPH0 4.55e-197 1 347 1 347
Beta-hexosaminidase OS=Pasteurella multocida (strain Pm70) OX=272843 GN=nagZ PE=3 SV=1
P44955 4.81e-192 1 344 1 343
Beta-hexosaminidase OS=Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd) OX=71421 GN=nagZ PE=3 SV=1
Q4QLU8 6.82e-192 1 344 1 343
Beta-hexosaminidase OS=Haemophilus influenzae (strain 86-028NP) OX=281310 GN=nagZ PE=3 SV=1

SignalP and Lipop Annotations help

This protein is predicted as OTHER

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
1.000057 0.000000 0.000000 0.000000 0.000000 0.000000

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000000993_00646.